Should you encounter any unexpected behaviour,
please let us know.

* SIGNALING PROTEIN 01-APR-11 3AXC *

B-factor analysis for ID 240110220248539074

Overall B-factor prediction

Correlation= 0.519 for 149 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA MET 1 0.1190 38.1522 40.6900
10 CA GLN 2 0.0974 35.6659 35.9200
19 CA ILE 3 0.0528 30.5413 32.4500
27 CA PHE 4 0.0599 31.3504 30.3400
38 CA VAL 5 0.0353 28.5193 28.7000
45 CA LYS 6 0.0684 32.3356 31.1300
54 CA THR 7 0.0875 34.5262 34.5700
61 CA LEU 8 0.1976 47.1965 37.4300
69 CA THR 9 0.2861 57.3876 38.8800
76 CA GLY 10 0.2105 48.6810 38.2700
80 CA LYS 11 0.1579 42.6325 37.9300
89 CA THR 12 0.1102 37.1399 34.1100
96 CA ILE 13 0.0745 33.0389 32.2000
104 CA THR 14 0.0881 34.6031 34.2000
111 CA LEU 15 0.0700 32.5193 37.1600
119 CA GLU 16 0.1137 37.5398 39.1000
128 CA VAL 17 0.0801 33.6785 36.8200
135 CA GLU 18 0.1038 36.4115 38.8600
144 CA PRO 19 0.0925 35.1077 38.8200
151 CA SER 20 0.1333 39.8062 38.8600
157 CA ASP 21 0.0905 34.8702 35.2700
165 CA THR 22 0.0826 33.9664 31.9000
172 CA ILE 23 0.0513 30.3660 30.4000
180 CA GLU 24 0.0909 34.9164 31.5600
189 CA ASN 25 0.0912 34.9575 30.7900
197 CA VAL 26 0.0414 29.2223 28.6700
204 CA LYS 27 0.0513 30.3651 26.5200
213 CA ALA 28 0.1030 36.3097 29.7700
218 CA LYS 29 0.0906 34.8892 30.9500
227 CA ILE 30 0.0594 31.3016 30.3600
235 CA GLN 31 0.1046 36.5019 32.6300
244 CA ASP 32 0.1747 44.5679 36.5900
252 CA LYS 33 0.1427 40.8842 36.0800
261 CA GLU 34 0.1247 38.8078 35.4600
270 CA GLY 35 0.1654 43.4937 35.8200
274 CA ILE 36 0.0950 35.3961 32.3200
282 CA PRO 37 0.1223 38.5361 32.9200
289 CA PRO 38 0.0918 35.0201 32.0900
296 CA ASP 39 0.1295 39.3607 34.1400
304 CA GLN 40 0.0852 34.2633 32.4200
313 CA GLN 41 0.0522 30.4704 27.9800
322 CA ARG 42 0.0554 30.8310 27.7300
333 CA LEU 43 0.0342 28.3982 26.9100
341 CA ILE 44 0.0614 31.5277 28.5900
349 CA PHE 45 0.0761 33.2212 28.8400
360 CA ALA 46 0.1861 45.8770 31.6800
365 CA GLY 47 0.2464 52.8216 34.4000
369 CA LYS 48 0.1569 42.5136 34.9800
378 CA GLN 49 0.0997 35.9395 34.9300
387 CA LEU 50 0.0693 32.4331 33.3700
395 CA GLU 51 0.0943 35.3075 35.3800
404 CA ASP 52 0.1016 36.1494 36.8400
412 CA GLY 53 0.1400 40.5752 37.9100
416 CA ARG 54 0.1097 37.0885 37.2800
427 CA THR 55 0.0824 33.9469 37.0000
434 CA LEU 56 0.0520 30.4420 36.1100
442 CA SER 57 0.0926 35.1181 38.0300
448 CA ASP 58 0.1214 38.4363 36.7900
456 CA TYR 59 0.0898 34.7952 34.8000
468 CA ASN 60 0.1119 37.3338 36.7100
476 CA ILE 61 0.0615 31.5395 34.7200
484 CA GLN 62 0.0939 35.2716 36.5000
493 CA LYS 63 0.1159 37.8038 36.5200
502 CA GLU 64 0.1163 37.8449 33.5700
511 CA SER 65 0.0792 33.5770 28.1600
517 CA THR 66 0.0708 32.6134 27.1000
524 CA LEU 67 0.0395 29.0075 27.1800
532 CA HIS 68 0.0508 30.3095 28.1000
542 CA LEU 69 0.0351 28.4949 27.8300
550 CA VAL 70 0.0641 31.8323 31.4800
557 CA LEU 71 0.0723 32.7787 36.3900
565 CA ARG 72 0.1104 37.1599 43.9900
576 CA LEU 73 0.1513 41.8743 51.7600
584 CA ARG 74 0.1526 42.0239 54.6800
595 CA GLY 75 0.2427 52.3930 55.9800
599 CA GLY 76 0.1689 43.8949 53.5900
603 CA MET 77 0.0774 33.3631 46.3600
611 CA GLN 78 0.0694 32.4472 40.1400
620 CA ILE 79 0.0479 29.9705 34.5300
628 CA PHE 80 0.0636 31.7826 33.2500
639 CA VAL 81 0.0457 29.7240 33.6800
646 CA LYS 82 0.0836 34.0840 35.4400
655 CA THR 83 0.1069 36.7681 37.0100
662 CA LEU 84 0.2022 47.7350 41.4400
670 CA THR 85 0.3373 63.2796 46.0200
677 CA GLY 86 0.2503 53.2688 46.8500
681 CA LYS 87 0.1748 44.5744 45.3300
690 CA THR 88 0.1316 39.6057 44.2000
697 CA ILE 89 0.0910 34.9310 42.5400
705 CA THR 90 0.0871 34.4888 38.6800
712 CA LEU 91 0.0616 31.5502 35.9100
720 CA GLU 92 0.0744 33.0176 34.7500
729 CA VAL 93 0.0615 31.5337 32.4100
736 CA GLU 94 0.0893 34.7316 33.0700
745 CA PRO 95 0.0860 34.3571 33.6700
752 CA SER 96 0.1288 39.2881 35.0200
758 CA ASP 97 0.0820 33.8931 32.9100
766 CA THR 98 0.0764 33.2513 32.5500
773 CA ILE 99 0.0409 29.1614 31.9200
781 CA GLU 100 0.0730 32.8563 35.5900
790 CA ASN 101 0.0735 32.9230 34.1900
798 CA VAL 102 0.0339 28.3659 32.5500
805 CA LYS 103 0.0382 28.8589 35.0100
814 CA ALA 104 0.0734 32.9123 39.3100
819 CA LYS 105 0.0682 32.3089 40.4900
828 CA ILE 106 0.0494 30.1452 40.2700
836 CA GLN 107 0.0795 33.6111 44.5200
845 CA ASP 108 0.1133 37.5024 46.6100
853 CA LYS 109 0.1034 36.3635 48.1800
862 CA GLU 110 0.1020 36.1945 51.4600
871 CA GLY 111 0.1516 41.9044 52.2000
875 CA ILE 112 0.0939 35.2703 50.5500
883 CA PRO 113 0.1108 37.2127 49.1100
890 CA PRO 114 0.0701 32.5293 46.0700
897 CA ASP 115 0.1159 37.8025 46.3300
905 CA GLN 116 0.0853 34.2790 42.9400
914 CA GLN 117 0.0437 29.4841 37.3700
923 CA ARG 118 0.0472 29.8968 35.5500
934 CA LEU 119 0.0289 27.7876 30.0800
942 CA ILE 120 0.0563 30.9414 27.3500
950 CA PHE 121 0.0694 32.4463 26.2300
961 CA ALA 122 0.1675 43.7405 29.2900
966 CA GLY 123 0.2224 50.0601 33.4700
970 CA LYS 124 0.1314 39.5810 33.9400
979 CA GLN 125 0.0886 34.6541 34.2100
988 CA LEU 126 0.0576 31.0871 33.2800
996 CA GLU 127 0.0903 34.8574 33.3200
1005 CA ASP 128 0.0831 34.0208 36.2500
1013 CA GLY 129 0.1341 39.8891 39.2400
1017 CA ARG 130 0.1101 37.1298 38.1700
1028 CA THR 131 0.0812 33.8082 36.5800
1035 CA LEU 132 0.0505 30.2716 33.5100
1043 CA SER 133 0.0958 35.4908 35.3500
1049 CA ASP 134 0.1229 38.5993 33.6300
1057 CA TYR 135 0.0843 34.1631 30.7100
1069 CA ASN 136 0.1008 36.0631 32.9400
1077 CA ILE 137 0.0527 30.5290 29.6500
1085 CA GLN 138 0.0723 32.7825 31.1700
1094 CA LYS 139 0.0806 33.7336 31.8100
1103 CA GLU 140 0.0923 35.0794 30.5900
1112 CA SER 141 0.0715 32.6926 29.2600
1118 CA THR 142 0.0665 32.1127 29.1700
1125 CA LEU 143 0.0400 29.0597 28.1900
1133 CA HIS 144 0.0599 31.3510 27.9300
1143 CA LEU 145 0.0466 29.8239 29.8600
1151 CA VAL 146 0.0803 33.7069 35.1800
1158 CA LEU 147 0.1033 36.3500 40.6900
1166 CA ARG 148 0.1321 39.6628 46.7100
1177 CA LEU 149 0.3728 67.3618 51.8900

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.