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B-factor analysis for ID 2401141615481063816

Overall B-factor prediction

%Bfactors-Wn> Experimental B-factors are nearly constant !

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     3 CA   GLY      1      0.2140      0.0000      0.0000
     8 CA   SER      2      0.1274      0.0000      0.0000
    14 CA   PRO      3      0.0495      0.0000      0.0000
    22 CA   GLU      4      0.0261      0.0000      0.0000
    32 CA   VAL      5      0.0474      0.0000      0.0000
    40 CA   GLN      6      0.0464      0.0000      0.0000
    50 CA   ILE      7      0.0198      0.0000      0.0000
    59 CA   ALA      8      0.0293      0.0000      0.0000
    65 CA   ILE      9      0.0468      0.0000      0.0000
    74 CA   LEU     10      0.0323      0.0000      0.0000
    83 CA   THR     11      0.0296      0.0000      0.0000
    91 CA   GLU     12      0.0425      0.0000      0.0000
   101 CA   GLN     13      0.0443      0.0000      0.0000
   111 CA   ILE     14      0.0345      0.0000      0.0000
   120 CA   ASN     15      0.0416      0.0000      0.0000
   129 CA   ASN     16      0.0467      0.0000      0.0000
   138 CA   LEU     17      0.0309      0.0000      0.0000
   147 CA   ASN     18      0.0332      0.0000      0.0000
   156 CA   GLU     19      0.0564      0.0000      0.0000
   166 CA   HIS     20      0.0494      0.0000      0.0000
   177 CA   LEU     21      0.0284      0.0000      0.0000
   186 CA   ARG     22      0.0783      0.0000      0.0000
   198 CA   VAL     23      0.1169      0.0000      0.0000
   206 CA   HIS     24      0.1051      0.0000      0.0000
   217 CA   LYS     25      0.1324      0.0000      0.0000
   227 CA   LYS     26      0.1100      0.0000      0.0000
   237 CA   ASP     27      0.1002      0.0000      0.0000
   246 CA   HIS     28      0.1206      0.0000      0.0000
   257 CA   HIS     29      0.1021      0.0000      0.0000
   268 CA   SER     30      0.0434      0.0000      0.0000
   275 CA   ARG     31      0.0364      0.0000      0.0000
   287 CA   ARG     32      0.0637      0.0000      0.0000
   299 CA   GLY     33      0.0636      0.0000      0.0000
   304 CA   LEU     34      0.0330      0.0000      0.0000
   313 CA   LEU     35      0.0577      0.0000      0.0000
   322 CA   LYS     36      0.0688      0.0000      0.0000
   332 CA   MET     37      0.0399      0.0000      0.0000
   341 CA   VAL     38      0.0456      0.0000      0.0000
   349 CA   GLY     39      0.0719      0.0000      0.0000
   354 CA   LYS     40      0.0461      0.0000      0.0000
   364 CA   ARG     41      0.0288      0.0000      0.0000
   376 CA   ARG     42      0.0322      0.0000      0.0000
   388 CA   ARG     43      0.0425      0.0000      0.0000
   400 CA   LEU     44      0.0219      0.0000      0.0000
   409 CA   LEU     45      0.0117      0.0000      0.0000
   418 CA   ALA     46      0.0225      0.0000      0.0000
   424 CA   TYR     47      0.0315      0.0000      0.0000
   437 CA   LEU     48      0.0164      0.0000      0.0000
   446 CA   ARG     49      0.0190      0.0000      0.0000
   458 CA   ASN     50      0.0504      0.0000      0.0000
   467 CA   LYS     51      0.0793      0.0000      0.0000
   477 CA   ASP     52      0.0577      0.0000      0.0000
   486 CA   VAL     53      0.0646      0.0000      0.0000
   494 CA   ALA     54      0.0922      0.0000      0.0000
   500 CA   ARG     55      0.0721      0.0000      0.0000
   512 CA   TYR     56      0.0252      0.0000      0.0000
   525 CA   ARG     57      0.0243      0.0000      0.0000
   537 CA   GLU     58      0.0507      0.0000      0.0000
   547 CA   ILE     59      0.0325      0.0000      0.0000
   556 CA   VAL     60      0.0153      0.0000      0.0000
   564 CA   GLU     61      0.0364      0.0000      0.0000
   574 CA   LYS     62      0.0634      0.0000      0.0000
   584 CA   LEU     63      0.0338      0.0000      0.0000
   593 CA   GLY     64      0.0413      0.0000      0.0000
   598 CA   LEU     65      0.1169      0.0000      0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.