CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  pilBrmn  ***

B-factor analysis for ID 2401191049571849476

Overall B-factor prediction

Correlation= -0.793 for 141 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     5 CA   MET      1      0.0829    148.4833     39.2500
    22 CA   SER      2      0.0533    125.2708     39.9700
    33 CA   GLY      3      0.0283    105.6403     55.4700
    40 CA   ARG      4      0.0169     96.6757     74.0600
    64 CA   LEU      5      0.0040     86.5550     84.3800
    83 CA   GLY      6      0.0035     86.1277     86.0000
    90 CA   GLU      7      0.0070     88.8967     88.8100
   105 CA   LEU      8      0.0059     88.0582     89.0000
   124 CA   LEU      9      0.0033     85.9858     91.7500
   143 CA   VAL     10      0.0061     88.2269     93.4400
   159 CA   ARG     11      0.0151     95.2297     90.9400
   183 CA   GLU     12      0.0106     91.7116     89.7500
   198 CA   ASN     13      0.0163     96.2399     92.2500
   212 CA   LEU     14      0.0056     87.8355     92.2500
   231 CA   ILE     15      0.0048     87.1911     93.8800
   250 CA   SER     16      0.0100     91.2816     94.9400
   261 CA   VAL     17      0.0119     92.7713     93.4400
   277 CA   GLN     18      0.0137     94.1469     93.8100
   294 CA   GLN     19      0.0063     88.3522     94.0000
   311 CA   LEU     20      0.0041     86.6549     93.5000
   330 CA   ARG     21      0.0097     91.0219     92.8100
   354 CA   LYS     22      0.0083     89.9639     92.9400
   376 CA   ALA     23      0.0042     86.7146     92.1900
   386 CA   GLN     24      0.0068     88.7672     92.1200
   403 CA   GLU     25      0.0126     93.2651     91.6200
   418 CA   GLU     26      0.0095     90.8743     89.1900
   433 CA   GLN     27      0.0086     90.1324     88.1900
   450 CA   GLN     28      0.0209     99.8084     88.5600
   467 CA   LYS     29      0.0294    106.4464     88.4400
   489 CA   ASN     30      0.0246    102.7132     84.0000
   503 CA   GLY     31      0.0338    109.9105     80.8100
   510 CA   THR     32      0.0110     92.0564     80.9400
   524 CA   ARG     33      0.0053     87.5947     82.6200
   548 CA   ILE     34      0.0038     86.3977     86.6200
   567 CA   GLY     35      0.0028     85.6450     86.8800
   574 CA   THR     36      0.0039     86.5052     85.7500
   588 CA   ALA     37      0.0041     86.6224     89.7500
   598 CA   LEU     38      0.0026     85.4789     91.1200
   617 CA   VAL     39      0.0041     86.6466     91.1900
   633 CA   LYS     40      0.0094     90.7629     89.2500
   655 CA   THR     41      0.0081     89.7440     91.6200
   669 CA   GLY     42      0.0099     91.2022     91.8100
   676 CA   ALA     43      0.0048     87.1604     92.6200
   686 CA   ILE     44      0.0038     86.4153     93.0000
   705 CA   GLU     45      0.0076     89.3839     91.2500
   720 CA   GLU     46      0.0046     87.0064     87.7500
   735 CA   SER     47      0.0082     89.8472     88.9400
   746 CA   LYS     48      0.0058     87.9845     90.4400
   768 CA   LEU     49      0.0028     85.6043     89.9400
   787 CA   THR     50      0.0036     86.2097     89.9400
   801 CA   ASP     51      0.0053     87.5636     90.6900
   813 CA   PHE     52      0.0038     86.4252     90.8800
   833 CA   LEU     53      0.0034     86.0717     89.0600
   852 CA   SER     54      0.0047     87.1057     91.1900
   863 CA   LYS     55      0.0096     90.9735     90.3100
   885 CA   GLN     56      0.0065     88.4905     87.3800
   902 CA   TYR     57      0.0070     88.9093     87.5600
   923 CA   GLY     58      0.0225    101.0498     90.3800
   930 CA   VAL     59      0.0067     88.6586     92.1200
   945 CA   PRO     60      0.0073     89.1502     93.0000
   960 CA   ALA     61      0.0044     86.8929     92.6900
   970 CA   ILE     62      0.0042     86.6896     92.3800
   989 CA   ASN     63      0.0060     88.1493     88.7500
  1003 CA   LEU     64      0.0035     86.1534     90.3100
  1022 CA   LYS     65      0.0092     90.5961     87.7500
  1044 CA   ASP     66      0.0172     96.9202     87.4400
  1056 CA   PHE     67      0.0072     89.0248     87.0600
  1076 CA   ASP     68      0.0115     92.4206     90.2500
  1088 CA   VAL     69      0.0045     86.9763     93.0600
  1104 CA   GLU     70      0.0094     90.7987     93.0000
  1118 CA   PRO     71      0.0109     91.9599     92.7500
  1133 CA   ASP     72      0.0104     91.5614     93.6900
  1145 CA   ILE     73      0.0040     86.5536     94.8800
  1164 CA   ILE     74      0.0031     85.8774     95.2500
  1183 CA   LYS     75      0.0074     89.2017     94.2500
  1205 CA   LEU     76      0.0041     86.6069     95.0000
  1224 CA   VAL     77      0.0025     85.4099     95.6900
  1239 CA   PRO     78      0.0052     87.4656     94.6900
  1254 CA   LYS     79      0.0060     88.1347     94.8800
  1276 CA   GLU     80      0.0092     90.6357     93.3100
  1291 CA   VAL     81      0.0049     87.2601     93.6900
  1307 CA   ALA     82      0.0029     85.6904     94.3100
  1317 CA   GLU     83      0.0052     87.4703     93.0000
  1332 CA   LYS     84      0.0091     90.5784     91.0600
  1354 CA   HIS     85      0.0043     86.8197     91.8800
  1371 CA   LEU     86      0.0033     86.0275     92.3800
  1390 CA   VAL     87      0.0020     84.9524     95.0600
  1406 CA   VAL     88      0.0014     84.4763     95.8100
  1421 CA   PRO     89      0.0014     84.4943     96.2500
  1436 CA   VAL     90      0.0020     84.9612     95.3100
  1452 CA   ASN     91      0.0040     86.5182     95.0000
  1466 CA   ARG     92      0.0064     88.4209     94.6200
  1490 CA   ALA     93      0.0138     94.2501     92.3800
  1500 CA   GLY     94      0.0323    108.7434     92.2500
  1506 CA   PRO     95      0.0190     98.3427     95.1200
  1521 CA   SER     96      0.0076     89.3866     96.5000
  1532 CA   LEU     97      0.0032     85.9108     96.7500
  1551 CA   ILE     98      0.0026     85.4737     96.0600
  1570 CA   VAL     99      0.0015     84.5959     96.3800
  1586 CA   ALA    100      0.0018     84.8340     95.7500
  1596 CA   MET    101      0.0023     85.2422     93.5000
  1613 CA   CYS    102      0.0029     85.7141     86.0000
  1624 CA   ASP    103      0.0039     86.4573     85.5000
  1635 CA   PRO    104      0.0042     86.6933     87.2500
  1650 CA   SER    105      0.0117     92.5896     86.5000
  1661 CA   ASN    106      0.0071     88.9694     88.0000
  1675 CA   ILE    107      0.0113     92.2697     89.6900
  1694 CA   PHE    108      0.0123     93.1015     91.5600
  1714 CA   ALA    109      0.0053     87.5725     92.6200
  1724 CA   VAL    110      0.0049     87.2288     94.5000
  1740 CA   ASP    111      0.0089     90.3694     94.5600
  1752 CA   ASP    112      0.0071     88.9552     94.3100
  1764 CA   LEU    113      0.0035     86.1958     95.4400
  1783 CA   LYS    114      0.0065     88.5466     95.8800
  1805 CA   PHE    115      0.0143     94.6619     95.0600
  1825 CA   LEU    116      0.0077     89.4597     94.8100
  1844 CA   THR    117      0.0055     87.7665     94.4400
  1858 CA   GLY    118      0.0122     93.0136     95.1200
  1865 CA   TYR    119      0.0068     88.7473     96.7500
  1886 CA   ASN    120      0.0091     90.5913     95.9400
  1900 CA   ILE    121      0.0042     86.6998     95.8800
  1919 CA   GLU    122      0.0048     87.1845     94.9400
  1934 CA   THR    123      0.0029     85.6610     95.1200
  1948 CA   VAL    124      0.0029     85.6699     95.0000
  1964 CA   VAL    125      0.0030     85.7651     93.9400
  1980 CA   ALA    126      0.0028     85.5970     93.1900
  1990 CA   SER    127      0.0034     86.0604     90.2500
  2001 CA   GLU    128      0.0037     86.3278     89.1200
  2016 CA   VAL    129      0.0051     87.3988     88.1900
  2032 CA   SER    130      0.0040     86.5442     91.3100
  2043 CA   ILE    131      0.0027     85.5003     93.1900
  2062 CA   ARG    132      0.0043     86.7916     91.8800
  2086 CA   GLU    133      0.0057     87.9124     92.3800
  2101 CA   ALA    134      0.0032     85.9465     93.6200
  2111 CA   ILE    135      0.0034     86.0574     93.9400
  2130 CA   GLU    136      0.0077     89.4673     92.7500
  2145 CA   ARG    137      0.0077     89.4555     92.1900
  2169 CA   TYR    138      0.0047     87.1056     92.8100
  2190 CA   TYR    139      0.0061     88.2200     91.5600
  2211 CA   ALA    140      0.0226    101.1554     80.8800
  2221 CA   GLU    141      0.0572    128.2593     61.8100

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.