Should you encounter any unexpected behaviour,
please let us know.

* 1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000 *

B-factor analysis for ID 240220085926145927

Overall B-factor prediction

Correlation= -0.762 for 267 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA ALA 1 0.1817 134.0673 62.0300
7 CA ALA 2 0.0644 108.1974 69.5000
12 CA PRO 3 0.0496 104.9385 86.7500
19 CA TYR 4 0.0230 99.0777 95.3100
31 CA GLU 5 0.0207 98.5753 97.1900
40 CA ASN 6 0.0243 99.3621 97.3100
48 CA LEU 7 0.0154 97.4133 98.3800
56 CA MET 8 0.0173 97.8195 98.5600
64 CA VAL 9 0.0132 96.9272 98.7500
71 CA PRO 10 0.0177 97.9013 98.6200
78 CA SER 11 0.0177 97.9174 98.6200
84 CA PRO 12 0.0402 102.8675 98.4400
91 CA SER 13 0.0196 98.3358 98.3800
97 CA MET 14 0.0165 97.6554 98.4400
105 CA GLY 15 0.0359 101.9254 98.1200
109 CA ARG 16 0.0308 100.7920 98.3100
120 CA ASP 17 0.0218 98.8127 98.5600
128 CA ILE 18 0.0129 96.8577 98.7500
136 CA PRO 19 0.0110 96.4395 98.6200
143 CA VAL 20 0.0088 95.9442 98.8100
150 CA ALA 21 0.0100 96.2107 98.6200
155 CA PHE 22 0.0088 95.9406 98.6900
166 CA LEU 23 0.0132 96.9255 98.3100
174 CA ALA 24 0.0161 97.5486 97.6200
179 CA GLY 25 0.0223 98.9192 96.1900
183 CA GLY 26 0.0223 98.9311 95.9400
187 CA PRO 27 0.0186 98.1177 97.5600
194 CA HIS 28 0.0119 96.6345 98.3800
204 CA ALA 29 0.0060 95.3430 98.6200
209 CA VAL 30 0.0053 95.1887 98.8100
216 CA TYR 31 0.0034 94.7499 98.9400
228 CA LEU 32 0.0038 94.8502 98.9400
236 CA LEU 33 0.0034 94.7526 98.9400
244 CA ASP 34 0.0040 94.8829 98.8100
252 CA ALA 35 0.0050 95.1105 98.7500
257 CA PHE 36 0.0049 95.1007 98.8100
268 CA ASN 37 0.0076 95.6854 98.2500
276 CA ALA 38 0.0081 95.7871 98.3800
281 CA GLY 39 0.0233 99.1477 97.6900
285 CA PRO 40 0.0386 102.5211 97.1200
292 CA ASP 41 0.0351 101.7486 97.1200
300 CA VAL 42 0.0145 97.2045 97.7500
307 CA SER 43 0.0082 95.8088 98.3800
313 CA ASN 44 0.0085 95.8797 98.3100
321 CA TRP 45 0.0060 95.3250 98.3800
335 CA VAL 46 0.0095 96.0996 97.8800
342 CA THR 47 0.0237 99.2238 96.7500
349 CA ALA 48 0.0188 98.1622 97.0000
354 CA GLY 49 0.0127 96.8110 97.2500
358 CA ASN 50 0.0173 97.8321 96.8800
366 CA ALA 51 0.0113 96.5086 98.0000
371 CA MET 52 0.0115 96.5435 97.5600
379 CA ASN 53 0.0253 99.5890 97.1900
387 CA THR 54 0.0215 98.7493 97.5000
394 CA LEU 55 0.0137 97.0354 97.6200
402 CA ALA 56 0.0195 98.3087 96.7500
407 CA GLY 57 0.0388 102.5570 94.8800
411 CA LYS 58 0.0295 100.5228 96.1200
420 CA GLY 59 0.0237 99.2404 96.0600
424 CA ILE 60 0.0140 97.0955 97.8800
432 CA SER 61 0.0086 95.9042 98.5000
438 CA VAL 62 0.0072 95.5924 98.6900
445 CA VAL 63 0.0047 95.0452 98.8800
452 CA ALA 64 0.0049 95.0858 98.8100
457 CA PRO 65 0.0052 95.1601 98.7500
464 CA ALA 66 0.0066 95.4709 98.5600
469 CA GLY 67 0.0096 96.1343 98.0600
473 CA GLY 68 0.0069 95.5350 97.8100
477 CA ALA 69 0.0080 95.7691 98.5000
482 CA TYR 70 0.0072 95.5906 98.4400
494 CA SER 71 0.0048 95.0764 98.5000
500 CA MET 72 0.0043 94.9601 92.5000
508 CA TYR 73 0.0040 94.9007 98.8100
520 CA THR 74 0.0054 95.1896 98.7500
527 CA ASN 75 0.0089 95.9741 98.6900
535 CA TRP 76 0.0089 95.9646 98.5000
549 CA GLU 77 0.0248 99.4861 97.2500
558 CA GLN 78 0.0337 101.4380 97.5000
567 CA ASP 79 0.0274 100.0423 96.8100
575 CA GLY 80 0.0282 100.2206 96.8100
579 CA SER 81 0.0195 98.3036 96.5000
585 CA LYS 82 0.0108 96.3880 98.1900
594 CA GLN 83 0.0079 95.7536 98.8100
603 CA TRP 84 0.0065 95.4388 98.8800
617 CA ASP 85 0.0079 95.7523 98.8100
625 CA THR 86 0.0086 95.9151 98.8100
632 CA PHE 87 0.0064 95.4227 98.8800
643 CA LEU 88 0.0063 95.3980 98.8800
651 CA SER 89 0.0088 95.9403 98.6900
657 CA ALA 90 0.0101 96.2379 98.5600
662 CA GLU 91 0.0094 96.0825 98.7500
671 CA LEU 92 0.0079 95.7411 98.8100
679 CA PRO 93 0.0095 96.1082 98.5600
686 CA ASP 94 0.0148 97.2748 98.5600
694 CA TRP 95 0.0158 97.4933 98.6900
708 CA LEU 96 0.0119 96.6239 98.6900
716 CA ALA 97 0.0212 98.6797 98.3800
721 CA ALA 98 0.0361 101.9671 98.2500
726 CA ASN 99 0.0263 99.8020 98.3100
734 CA ARG 100 0.0239 99.2803 97.7500
745 CA GLY 101 0.0280 100.1889 97.3800
749 CA LEU 102 0.0157 97.4614 98.3100
757 CA ALA 103 0.0181 98.0024 98.1200
762 CA PRO 104 0.0178 97.9261 96.1900
769 CA GLY 105 0.0146 97.2303 97.3100
773 CA GLY 106 0.0125 96.7735 97.5600
777 CA HIS 107 0.0065 95.4327 98.7500
787 CA ALA 108 0.0064 95.4215 98.8800
792 CA ALA 109 0.0036 94.8112 98.9400
797 CA VAL 110 0.0035 94.7719 98.9400
804 CA GLY 111 0.0034 94.7654 98.8100
808 CA ALA 112 0.0034 94.7688 98.6900
813 CA ALA 113 0.0035 94.7885 98.8100
818 CA GLN 114 0.0035 94.7900 98.8800
827 CA GLY 115 0.0035 94.7754 98.8800
831 CA GLY 116 0.0034 94.7679 98.8100
835 CA TYR 117 0.0033 94.7407 98.8800
847 CA GLY 118 0.0034 94.7676 98.8800
851 CA ALA 119 0.0039 94.8787 98.9400
856 CA MET 120 0.0038 94.8476 98.8800
864 CA ALA 121 0.0060 95.3313 98.8800
869 CA LEU 122 0.0054 95.2056 98.9400
877 CA ALA 123 0.0071 95.5755 98.6900
882 CA ALA 124 0.0082 95.8196 98.6200
887 CA PHE 125 0.0085 95.8804 98.6900
898 CA HIS 126 0.0101 96.2348 98.6900
908 CA PRO 127 0.0148 97.2770 98.1900
915 CA ASP 128 0.0227 99.0248 97.8100
923 CA ARG 129 0.0079 95.7610 98.1900
934 CA PHE 130 0.0076 95.6861 98.6900
945 CA GLY 131 0.0071 95.5650 98.0600
949 CA PHE 132 0.0058 95.2799 98.8100
960 CA ALA 133 0.0045 94.9922 98.8800
965 CA GLY 134 0.0041 94.9091 98.8100
969 CA SER 135 0.0037 94.8211 98.8800
975 CA MET 136 0.0035 94.7741 98.5000
983 CA SER 137 0.0038 94.8451 98.2500
989 CA GLY 138 0.0042 94.9317 98.3100
993 CA PHE 139 0.0034 94.7558 98.5600
1004 CA LEU 140 0.0036 94.8062 98.7500
1012 CA TYR 141 0.0060 95.3308 98.6200
1024 CA PRO 142 0.0060 95.3427 98.3100
1031 CA SER 143 0.0093 96.0704 98.1900
1037 CA ASN 144 0.0116 96.5676 97.7500
1045 CA THR 145 0.0441 103.7246 96.6200
1052 CA THR 146 0.0360 101.9354 97.1900
1059 CA THR 147 0.0101 96.2364 98.0000
1066 CA ASN 148 0.0107 96.3632 98.1200
1074 CA GLY 149 0.0165 97.6367 97.9400
1078 CA ALA 150 0.0134 96.9583 98.1900
1083 CA ILE 151 0.0085 95.8868 98.5000
1091 CA ALA 152 0.0111 96.4592 98.1900
1096 CA ALA 153 0.0192 98.2531 98.3100
1101 CA GLY 154 0.0133 96.9407 98.5000
1105 CA MET 155 0.0102 96.2586 98.3800
1113 CA GLN 156 0.0213 98.7081 98.3100
1122 CA GLN 157 0.0263 99.8053 98.3100
1131 CA PHE 158 0.0200 98.4240 98.2500
1142 CA GLY 159 0.0253 99.5968 97.5000
1146 CA GLY 160 0.0387 102.5441 97.7500
1150 CA VAL 161 0.0199 98.3918 97.0600
1157 CA ASP 162 0.0240 99.2933 97.1200
1165 CA THR 163 0.0128 96.8261 97.3800
1172 CA ASN 164 0.0168 97.7177 96.6900
1180 CA GLY 165 0.0142 97.1333 97.4400
1184 CA MET 166 0.0088 95.9498 97.9400
1192 CA TRP 167 0.0099 96.1882 97.5000
1206 CA GLY 168 0.0157 97.4679 96.3100
1210 CA ALA 169 0.0240 99.2968 95.0000
1215 CA PRO 170 0.0199 98.3897 92.2500
1222 CA GLN 171 0.0840 112.5305 90.1200
1231 CA LEU 172 0.0648 108.2904 92.5600
1239 CA GLY 173 0.0303 100.6878 92.9400
1243 CA ARG 174 0.0198 98.3719 95.5600
1254 CA TRP 175 0.0082 95.8163 98.0600
1268 CA LYS 176 0.0117 96.5898 98.0600
1277 CA TRP 177 0.0160 97.5421 97.7500
1291 CA HIS 178 0.0099 96.1927 98.1200
1301 CA ASP 179 0.0060 95.3397 98.4400
1309 CA PRO 180 0.0055 95.2226 98.5600
1316 CA TRP 181 0.0069 95.5345 98.6900
1330 CA VAL 182 0.0091 96.0068 98.6200
1337 CA HIS 183 0.0088 95.9553 98.6900
1347 CA ALA 184 0.0104 96.2982 98.8100
1352 CA SER 185 0.0172 97.8035 98.6200
1358 CA LEU 186 0.0150 97.3165 98.6900
1366 CA LEU 187 0.0100 96.2252 98.6900
1374 CA ALA 188 0.0142 97.1322 98.5000
1379 CA GLN 189 0.0346 101.6304 98.3800
1388 CA ASN 190 0.0264 99.8329 98.1900
1396 CA ASN 191 0.0223 98.9213 97.9400
1404 CA THR 192 0.0139 97.0770 98.4400
1411 CA ARG 193 0.0088 95.9574 98.7500
1422 CA VAL 194 0.0070 95.5502 98.7500
1429 CA TRP 195 0.0059 95.3078 98.8100
1443 CA VAL 196 0.0054 95.1962 98.8100
1450 CA TRP 197 0.0069 95.5243 98.5000
1464 CA SER 198 0.0060 95.3359 98.0600
1470 CA PRO 199 0.0110 96.4357 97.0000
1477 CA THR 200 0.0178 97.9253 94.2500
1484 CA ASN 201 0.0206 98.5549 91.7500
1492 CA PRO 202 0.0246 99.4406 93.0600
1499 CA GLY 203 0.0197 98.3575 93.8800
1503 CA ALA 204 0.0162 97.5922 96.8800
1508 CA SER 205 0.0343 101.5708 96.5000
1514 CA ASP 206 0.0201 98.4517 97.3800
1522 CA PRO 207 0.0199 98.4030 97.8100
1529 CA ALA 208 0.0148 97.2660 98.1900
1534 CA ALA 209 0.0077 95.7122 98.3100
1539 CA MET 210 0.0063 95.3941 98.5000
1547 CA ILE 211 0.0086 95.9109 98.6200
1555 CA GLY 212 0.0126 96.7837 98.1200
1559 CA GLN 213 0.0086 95.8991 97.9400
1568 CA ALA 214 0.0103 96.2788 97.5600
1573 CA ALA 215 0.0133 96.9401 96.6900
1578 CA GLU 216 0.0093 96.0530 97.5000
1587 CA ALA 217 0.0072 95.5923 96.6200
1592 CA MET 218 0.0075 95.6703 94.6900
1600 CA GLY 219 0.0094 96.0759 96.6900
1604 CA ASN 220 0.0068 95.5037 98.1200
1612 CA SER 221 0.0065 95.4531 97.9400
1618 CA ARG 222 0.0092 96.0292 97.6900
1629 CA MET 223 0.0078 95.7308 98.5600
1637 CA PHE 224 0.0060 95.3239 98.8100
1648 CA TYR 225 0.0100 96.2170 98.6200
1660 CA ASN 226 0.0153 97.3916 98.5600
1668 CA GLN 227 0.0114 96.5226 98.7500
1677 CA TYR 228 0.0086 95.9065 98.8100
1689 CA ARG 229 0.0195 98.3141 98.5000
1700 CA SER 230 0.0346 101.6322 98.6200
1706 CA VAL 231 0.0240 99.3020 98.6900
1713 CA GLY 232 0.0283 100.2437 98.3800
1717 CA GLY 233 0.0203 98.4758 98.5600
1721 CA HIS 234 0.0274 100.0551 98.0600
1731 CA ASN 235 0.0143 97.1554 98.4400
1739 CA GLY 236 0.0126 96.7911 98.3100
1743 CA HIS 237 0.0098 96.1643 98.6200
1753 CA PHE 238 0.0089 95.9639 98.5000
1764 CA ASP 239 0.0116 96.5718 97.6200
1772 CA PHE 240 0.0111 96.4652 97.7500
1783 CA PRO 241 0.0323 101.1279 97.0000
1790 CA ALA 242 0.0550 106.1433 93.9400
1795 CA SER 243 0.0611 107.4860 91.8100
1801 CA GLY 244 0.0298 100.5697 93.1900
1805 CA ASP 245 0.0115 96.5425 94.0000
1813 CA ASN 246 0.0084 95.8576 96.8800
1821 CA GLY 247 0.0099 96.1924 97.4400
1825 CA TRP 248 0.0085 95.8811 97.3800
1839 CA GLY 249 0.0177 97.9184 96.5000
1843 CA SER 250 0.0117 96.5864 97.6900
1849 CA TRP 251 0.0067 95.4812 98.1900
1863 CA ALA 252 0.0096 96.1345 98.1900
1868 CA PRO 253 0.0175 97.8601 97.8800
1875 CA GLN 254 0.0103 96.2775 97.8800
1884 CA LEU 255 0.0096 96.1239 98.4400
1892 CA GLY 256 0.0114 96.5194 98.0600
1896 CA ALA 257 0.0145 97.2034 97.8800
1901 CA MET 258 0.0101 96.2283 97.9400
1909 CA SER 259 0.0176 97.8959 97.7500
1915 CA GLY 260 0.0225 98.9798 97.8800
1919 CA ASP 261 0.0110 96.4437 98.2500
1927 CA ILE 262 0.0098 96.1702 98.3100
1935 CA VAL 263 0.0203 98.4874 97.5600
1942 CA GLY 264 0.0303 100.6878 97.2500
1946 CA ALA 265 0.0164 97.6328 97.3800
1951 CA ILE 266 0.0142 97.1314 96.1900
1959 CA ARG 267 0.0377 102.3297 78.8100

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.