Should you encounter any unexpected behaviour,
please let us know.

* bec_luci_A *

B-factor analysis for ID 2404021201272023130

Overall B-factor prediction

Correlation= 0.881 for 136 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA CYS 253 0.4898 92.6769 86.1000
8 CA HIS 254 0.1624 50.0664 48.4500
18 CA PRO 255 0.0522 35.7222 39.3100
25 CA CYS 256 0.0276 32.5233 35.4700
31 CA PRO 257 0.0345 33.4246 33.8600
38 CA TRP 258 0.1153 43.9403 35.2400
52 CA GLU 259 0.0728 38.4054 38.6600
61 CA TRP 260 0.0179 31.2609 34.2500
75 CA THR 261 0.0166 31.0944 33.3800
82 CA PHE 262 0.0212 31.6836 31.2900
93 CA PHE 263 0.0189 31.3944 29.8700
104 CA GLN 264 0.0411 34.2725 31.1700
113 CA GLY 265 0.0439 34.6380 31.4100
117 CA ASN 266 0.0167 31.1018 32.2600
125 CA CYS 267 0.0106 30.3084 29.4000
131 CA TYR 268 0.0092 30.1253 30.4300
143 CA PHE 269 0.0106 30.3102 30.3400
154 CA MET 270 0.0128 30.5979 32.5500
162 CA SER 271 0.0188 31.3733 26.9100
168 CA ASN 272 0.0484 35.2255 31.4000
169 CA ASN 272 0.0482 35.2023 32.7100
181 CA SER 273 0.0308 32.9402 36.5600
187 CA GLN 274 0.0190 31.4038 34.0900
196 CA ARG 275 0.0126 30.5641 30.8900
207 CA ASN 276 0.0111 30.3695 29.2300
215 CA TRP 277 0.0072 29.8682 29.7200
229 CA HIS 278 0.0153 30.9202 27.3900
239 CA ASP 279 0.0175 31.2091 29.9100
247 CA SER 280 0.0090 30.0966 29.4800
253 CA ILE 281 0.0123 30.5353 34.6900
261 CA THR 282 0.0276 32.5194 35.3000
268 CA ALA 283 0.0194 31.4507 29.6400
273 CA CYS 284 0.0126 30.5651 31.7600
279 CA LYS 285 0.0292 32.7332 42.4200
288 CA GLU 286 0.0707 38.1304 51.3000
297 CA VAL 287 0.0389 33.9966 43.2400
304 CA GLY 288 0.0587 36.5634 35.7200
308 CA ALA 289 0.0153 30.9179 29.3700
313 CA GLN 290 0.0112 30.3880 28.4200
314 CA GLN 290 0.0112 30.3899 30.9400
328 CA LEU 291 0.0066 29.7923 27.9900
336 CA VAL 292 0.0060 29.7164 31.0800
343 CA VAL 293 0.0081 29.9775 27.5900
350 CA ILE 294 0.0076 29.9169 30.3500
358 CA LYS 295 0.0164 31.0627 37.0700
367 CA SER 296 0.0234 31.9707 35.3000
373 CA ALA 297 0.0218 31.7687 32.6500
378 CA GLU 298 0.0271 32.4564 39.3600
379 CA GLU 298 0.0271 32.4588 36.6200
393 CA GLU 299 0.0118 30.4610 35.8300
402 CA GLN 300 0.0102 30.2568 34.2500
411 CA ASN 301 0.0158 30.9836 36.5000
419 CA PHE 302 0.0135 30.6836 29.4600
430 CA LEU 303 0.0086 30.0498 27.1900
438 CA GLN 304 0.0111 30.3703 23.2900
447 CA LEU 305 0.0226 31.8710 30.3200
455 CA GLN 306 0.0176 31.2157 34.3700
464 CA SER 307 0.0144 30.7976 35.3900
470 CA SER 308 0.0246 32.1326 37.7200
476 CA ARG 309 0.0567 36.3088 42.1600
487 CA SER 310 0.0562 36.2393 33.6400
493 CA ASN 311 0.0425 34.4621 37.7700
501 CA ARG 312 0.0225 31.8630 32.9000
512 CA PHE 313 0.0108 30.3414 25.8700
523 CA THR 314 0.0060 29.7154 23.6700
530 CA TRP 315 0.0049 29.5714 23.0800
544 CA MET 316 0.0043 29.4898 26.8900
552 CA GLY 317 0.0059 29.6940 26.6600
556 CA LEU 318 0.0052 29.6089 22.5300
564 CA SER 319 0.0079 29.9516 25.6900
570 CA ASP 320 0.0123 30.5353 26.0600
578 CA LEU 321 0.0226 31.8662 32.8200
586 CA ASN 322 0.0535 35.8973 37.2200
587 CA ASN 322 0.0538 35.9333 35.9400
599 CA GLN 323 0.0497 35.3971 39.7700
608 CA GLU 324 0.0347 33.4395 34.1400
617 CA GLY 325 0.0403 34.1686 30.6500
621 CA THR 326 0.0318 33.0659 32.3500
628 CA TRP 327 0.0095 30.1669 32.6500
642 CA GLN 328 0.0129 30.6070 34.0000
651 CA TRP 329 0.0092 30.1244 26.9000
665 CA VAL 330 0.0122 30.5121 26.4800
672 CA ASP 331 0.0303 32.8774 32.0700
680 CA GLY 332 0.0597 36.6963 34.3100
684 CA SER 333 0.0287 32.6622 35.2900
690 CA PRO 334 0.0268 32.4121 34.1500
697 CA LEU 335 0.0144 30.7986 33.9000
705 CA LEU 336 0.0320 33.0932 33.8900
713 CA PRO 337 0.0616 36.9523 36.9300
720 CA SER 338 0.0504 35.4943 39.1900
726 CA PHE 339 0.0150 30.8834 41.1600
737 CA LYS 340 0.0191 31.4149 37.8100
746 CA GLN 341 0.0296 32.7850 34.3100
755 CA TYR 342 0.0114 30.4136 31.2300
767 CA TRP 343 0.0103 30.2689 29.3500
781 CA ASN 344 0.0157 30.9745 34.3400
789 CA ARG 345 0.1345 46.4310 44.7600
800 CA GLY 346 0.2810 65.5060 34.8500
804 CA GLU 347 0.0182 31.2950 36.1900
813 CA PRO 348 0.0128 30.5980 31.6200
820 CA ASN 349 0.0369 33.7356 32.5900
828 CA ASN 350 0.0209 31.6528 34.9400
836 CA VAL 351 0.0535 35.8961 36.5400
843 CA GLY 352 0.0888 40.4934 35.7800
847 CA GLU 353 0.0348 33.4580 36.3300
856 CA GLU 354 0.0118 30.4650 28.7100
865 CA ASP 355 0.0090 30.0966 24.7700
873 CA CYS 356 0.0051 29.5952 29.4400
879 CA ALA 357 0.0037 29.4056 28.9400
884 CA GLU 358 0.0049 29.5679 25.4700
893 CA PHE 359 0.0056 29.6571 22.9900
904 CA SER 360 0.0100 30.2314 30.0300
910 CA GLY 361 0.0189 31.3958 34.5600
914 CA ASN 362 0.0307 32.9261 38.6300
922 CA GLY 363 0.0103 30.2703 34.4400
926 CA TRP 364 0.0065 29.7694 27.3000
940 CA ASN 365 0.0069 29.8245 27.7300
948 CA ASP 366 0.0075 29.9098 25.7100
956 CA ASP 367 0.0086 30.0530 29.2400
964 CA LYS 368 0.0137 30.7082 32.0500
973 CA CYS 369 0.0097 30.1960 28.7500
979 CA ASN 370 0.0292 32.7307 30.7200
987 CA LEU 371 0.0204 31.5793 29.3800
995 CA ALA 372 0.0162 31.0404 29.6400
1000 CA LYS 373 0.0085 30.0328 25.7000
1009 CA PHE 374 0.0101 30.2453 24.4800
1020 CA TRP 375 0.0075 29.9023 26.1500
1034 CA ILE 376 0.0060 29.7047 27.9700
1042 CA CYS 377 0.0077 29.9277 30.1700
1048 CA LYS 378 0.0090 30.1019 29.0100
1057 CA LYS 379 0.0151 30.8956 31.9300
1066 CA SER 380 0.0389 33.9919 36.4200
1072 CA ALA 381 0.0318 33.0707 39.0300
1077 CA ALA 382 0.1350 46.5013 57.0000
1082 CA SER 383 0.4392 86.0939 78.1400
1088 CA CYS 384 0.5031 94.4158 96.1800

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.