CNRS Nantes University US2B US2B
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B-factor analysis for ID 2404021611502062653

Overall B-factor prediction

%Bfactors-Wn> Experimental B-factors are nearly constant !

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   SER      1      0.0322      0.0000      0.0000
    15 CA   GLU      2      0.0092      0.0000      0.0000
    30 CA   MET      3      0.0053      0.0000      0.0000
    47 CA   ALA      4      0.0086      0.0000      0.0000
    57 CA   GLU      5      0.0075      0.0000      0.0000
    72 CA   VAL      6      0.0028      0.0000      0.0000
    88 CA   ILE      7      0.0034      0.0000      0.0000
   107 CA   ARG      8      0.0066      0.0000      0.0000
   131 CA   ALA      9      0.0031      0.0000      0.0000
   141 CA   SER     10      0.0020      0.0000      0.0000
   152 CA   ILE     11      0.0039      0.0000      0.0000
   171 CA   GLU     12      0.0048      0.0000      0.0000
   186 CA   HIS     13      0.0020      0.0000      0.0000
   203 CA   PHE     14      0.0024      0.0000      0.0000
   223 CA   LEU     15      0.0051      0.0000      0.0000
   242 CA   VAL     16      0.0040      0.0000      0.0000
   258 CA   LEU     17      0.0028      0.0000      0.0000
   277 CA   LYS     18      0.0050      0.0000      0.0000
   299 CA   GLN     19      0.0115      0.0000      0.0000
   316 CA   LEU     20      0.0064      0.0000      0.0000
   335 CA   ARG     21      0.0116      0.0000      0.0000
   359 CA   VAL     22      0.0048      0.0000      0.0000
   375 CA   ASP     23      0.0098      0.0000      0.0000
   387 CA   ALA     24      0.0205      0.0000      0.0000
   397 CA   TYR     25      0.0133      0.0000      0.0000
   418 CA   PRO     26      0.0202      0.0000      0.0000
   432 CA   GLU     27      0.0169      0.0000      0.0000
   447 CA   LEU     28      0.0063      0.0000      0.0000
   466 CA   SER     29      0.0052      0.0000      0.0000
   477 CA   ALA     30      0.0122      0.0000      0.0000
   487 CA   GLN     31      0.0067      0.0000      0.0000
   504 CA   CYS     32      0.0027      0.0000      0.0000
   515 CA   ALA     33      0.0046      0.0000      0.0000
   525 CA   GLN     34      0.0062      0.0000      0.0000
   542 CA   LEU     35      0.0028      0.0000      0.0000
   561 CA   GLN     36      0.0024      0.0000      0.0000
   578 CA   LYS     37      0.0064      0.0000      0.0000
   600 CA   ASP     38      0.0050      0.0000      0.0000
   612 CA   ILE     39      0.0025      0.0000      0.0000
   631 CA   SER     40      0.0052      0.0000      0.0000
   642 CA   LEU     41      0.0138      0.0000      0.0000
   661 CA   ALA     42      0.0059      0.0000      0.0000
   671 CA   LYS     43      0.0221      0.0000      0.0000
   693 CA   ASP     44      0.0114      0.0000      0.0000
   705 CA   THR     45      0.0048      0.0000      0.0000
   719 CA   THR     46      0.0044      0.0000      0.0000
   733 CA   GLU     47      0.0045      0.0000      0.0000
   748 CA   ALA     48      0.0024      0.0000      0.0000
   758 CA   CYS     49      0.0020      0.0000      0.0000
   769 CA   LYS     50      0.0031      0.0000      0.0000
   791 CA   LYS     51      0.0026      0.0000      0.0000
   813 CA   LEU     52      0.0015      0.0000      0.0000
   832 CA   LEU     53      0.0018      0.0000      0.0000
   851 CA   SER     54      0.0026      0.0000      0.0000
   862 CA   LEU     55      0.0017      0.0000      0.0000
   881 CA   SER     56      0.0018      0.0000      0.0000
   892 CA   SER     57      0.0027      0.0000      0.0000
   903 CA   VAL     58      0.0034      0.0000      0.0000
   919 CA   SER     59      0.0026      0.0000      0.0000
   930 CA   HIS     60      0.0029      0.0000      0.0000
   947 CA   SER     61      0.0113      0.0000      0.0000
   958 CA   MET     62      0.0076      0.0000      0.0000
   976 CA   SER      1      0.0322      0.0000      0.0000
   989 CA   GLU      2      0.0092      0.0000      0.0000
  1004 CA   MET      3      0.0053      0.0000      0.0000
  1021 CA   ALA      4      0.0086      0.0000      0.0000
  1031 CA   GLU      5      0.0075      0.0000      0.0000
  1046 CA   VAL      6      0.0028      0.0000      0.0000
  1062 CA   ILE      7      0.0034      0.0000      0.0000
  1081 CA   ARG      8      0.0066      0.0000      0.0000
  1105 CA   ALA      9      0.0031      0.0000      0.0000
  1115 CA   SER     10      0.0020      0.0000      0.0000
  1126 CA   ILE     11      0.0039      0.0000      0.0000
  1145 CA   GLU     12      0.0048      0.0000      0.0000
  1160 CA   HIS     13      0.0020      0.0000      0.0000
  1177 CA   PHE     14      0.0024      0.0000      0.0000
  1197 CA   LEU     15      0.0051      0.0000      0.0000
  1216 CA   VAL     16      0.0040      0.0000      0.0000
  1232 CA   LEU     17      0.0028      0.0000      0.0000
  1251 CA   LYS     18      0.0050      0.0000      0.0000
  1273 CA   GLN     19      0.0115      0.0000      0.0000
  1290 CA   LEU     20      0.0064      0.0000      0.0000
  1309 CA   ARG     21      0.0116      0.0000      0.0000
  1333 CA   VAL     22      0.0048      0.0000      0.0000
  1349 CA   ASP     23      0.0098      0.0000      0.0000
  1361 CA   ALA     24      0.0205      0.0000      0.0000
  1371 CA   TYR     25      0.0132      0.0000      0.0000
  1392 CA   PRO     26      0.0202      0.0000      0.0000
  1406 CA   GLU     27      0.0169      0.0000      0.0000
  1421 CA   LEU     28      0.0063      0.0000      0.0000
  1440 CA   SER     29      0.0052      0.0000      0.0000
  1451 CA   ALA     30      0.0122      0.0000      0.0000
  1461 CA   GLN     31      0.0067      0.0000      0.0000
  1478 CA   CYS     32      0.0027      0.0000      0.0000
  1489 CA   ALA     33      0.0046      0.0000      0.0000
  1499 CA   GLN     34      0.0062      0.0000      0.0000
  1516 CA   LEU     35      0.0028      0.0000      0.0000
  1535 CA   GLN     36      0.0024      0.0000      0.0000
  1552 CA   LYS     37      0.0064      0.0000      0.0000
  1574 CA   ASP     38      0.0050      0.0000      0.0000
  1586 CA   ILE     39      0.0025      0.0000      0.0000
  1605 CA   SER     40      0.0052      0.0000      0.0000
  1616 CA   LEU     41      0.0138      0.0000      0.0000
  1635 CA   ALA     42      0.0059      0.0000      0.0000
  1645 CA   LYS     43      0.0221      0.0000      0.0000
  1667 CA   ASP     44      0.0114      0.0000      0.0000
  1679 CA   THR     45      0.0048      0.0000      0.0000
  1693 CA   THR     46      0.0044      0.0000      0.0000
  1707 CA   GLU     47      0.0045      0.0000      0.0000
  1722 CA   ALA     48      0.0024      0.0000      0.0000
  1732 CA   CYS     49      0.0020      0.0000      0.0000
  1743 CA   LYS     50      0.0031      0.0000      0.0000
  1765 CA   LYS     51      0.0026      0.0000      0.0000
  1787 CA   LEU     52      0.0015      0.0000      0.0000
  1806 CA   LEU     53      0.0018      0.0000      0.0000
  1825 CA   SER     54      0.0026      0.0000      0.0000
  1836 CA   LEU     55      0.0017      0.0000      0.0000
  1855 CA   SER     56      0.0018      0.0000      0.0000
  1866 CA   SER     57      0.0027      0.0000      0.0000
  1877 CA   VAL     58      0.0034      0.0000      0.0000
  1893 CA   SER     59      0.0026      0.0000      0.0000
  1904 CA   HIS     60      0.0029      0.0000      0.0000
  1921 CA   SER     61      0.0113      0.0000      0.0000
  1932 CA   MET     62      0.0076      0.0000      0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.