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***  3pfq_allatom  ***

B-factor analysis for ID 240415112310379429

Overall B-factor prediction

%Bfactors-Wn> Experimental B-factors are nearly constant !

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     5 CA   LEU    339      0.0058      0.0000      0.0000
    24 CA   THR    340      0.0147      0.0000      0.0000
    38 CA   ASP    341      0.0086      0.0000      0.0000
    50 CA   PHE    342      0.0055      0.0000      0.0000
    70 CA   ASN    343      0.0057      0.0000      0.0000
    84 CA   PHE    344      0.0050      0.0000      0.0000
   104 CA   LEU    345      0.0064      0.0000      0.0000
   123 CA   MET    346      0.0064      0.0000      0.0000
   140 CA   VAL    347      0.0060      0.0000      0.0000
   156 CA   LEU    348      0.0063      0.0000      0.0000
   175 CA   GLY    349      0.0084      0.0000      0.0000
   182 CA   LYS    350      0.0103      0.0000      0.0000
   204 CA   GLY    351      0.0104      0.0000      0.0000
   211 CA   SER    352      0.0270      0.0000      0.0000
   222 CA   PHE    353      0.0082      0.0000      0.0000
   242 CA   GLY    354      0.0056      0.0000      0.0000
   249 CA   LYS    355      0.0051      0.0000      0.0000
   271 CA   VAL    356      0.0040      0.0000      0.0000
   287 CA   MET    357      0.0039      0.0000      0.0000
   304 CA   LEU    358      0.0037      0.0000      0.0000
   323 CA   SER    359      0.0039      0.0000      0.0000
   334 CA   GLU    360      0.0053      0.0000      0.0000
   349 CA   ARG    361      0.0067      0.0000      0.0000
   373 CA   LYS    362      0.0121      0.0000      0.0000
   395 CA   GLY    363      0.0270      0.0000      0.0000
   402 CA   THR    364      0.0187      0.0000      0.0000
   416 CA   ASP    365      0.0172      0.0000      0.0000
   428 CA   GLU    366      0.0096      0.0000      0.0000
   443 CA   LEU    367      0.0048      0.0000      0.0000
   462 CA   TYR    368      0.0031      0.0000      0.0000
   483 CA   ALA    369      0.0024      0.0000      0.0000
   493 CA   VAL    370      0.0019      0.0000      0.0000
   509 CA   LYS    371      0.0022      0.0000      0.0000
   531 CA   ILE    372      0.0023      0.0000      0.0000
   550 CA   LEU    373      0.0035      0.0000      0.0000
   569 CA   LYS    374      0.0046      0.0000      0.0000
   591 CA   LYS    375      0.0053      0.0000      0.0000
   613 CA   ASP    376      0.0086      0.0000      0.0000
   625 CA   VAL    377      0.0089      0.0000      0.0000
   641 CA   VAL    378      0.0076      0.0000      0.0000
   657 CA   ILE    379      0.0110      0.0000      0.0000
   676 CA   GLN    380      0.0197      0.0000      0.0000
   693 CA   ASP    381      0.0216      0.0000      0.0000
   705 CA   ASP    382      0.0185      0.0000      0.0000
   717 CA   ASP    383      0.0099      0.0000      0.0000
   729 CA   VAL    384      0.0070      0.0000      0.0000
   745 CA   GLU    385      0.0066      0.0000      0.0000
   760 CA   CYS    386      0.0058      0.0000      0.0000
   771 CA   THR    387      0.0036      0.0000      0.0000
   785 CA   MET    388      0.0035      0.0000      0.0000
   802 CA   VAL    389      0.0030      0.0000      0.0000
   818 CA   GLU    390      0.0024      0.0000      0.0000
   833 CA   LYS    391      0.0023      0.0000      0.0000
   855 CA   ARG    392      0.0029      0.0000      0.0000
   879 CA   VAL    393      0.0022      0.0000      0.0000
   895 CA   LEU    394      0.0020      0.0000      0.0000
   914 CA   ALA    395      0.0027      0.0000      0.0000
   924 CA   LEU    396      0.0028      0.0000      0.0000
   945 CA   PRO    397      0.0075      0.0000      0.0000
   957 CA   GLY    398      0.0075      0.0000      0.0000
   964 CA   LYS    399      0.0023      0.0000      0.0000
   988 CA   PRO    400      0.0023      0.0000      0.0000
  1002 CA   PRO    401      0.0026      0.0000      0.0000
  1014 CA   PHE    402      0.0019      0.0000      0.0000
  1034 CA   LEU    403      0.0017      0.0000      0.0000
  1053 CA   THR    404      0.0017      0.0000      0.0000
  1067 CA   GLN    405      0.0021      0.0000      0.0000
  1084 CA   LEU    406      0.0018      0.0000      0.0000
  1103 CA   HSD    407      0.0028      0.0000      0.0000
  1120 CA   SER    408      0.0026      0.0000      0.0000
  1131 CA   CYS    409      0.0020      0.0000      0.0000
  1142 CA   PHE    410      0.0022      0.0000      0.0000
  1162 CA   GLN    411      0.0030      0.0000      0.0000
  1179 CA   THR    412      0.0040      0.0000      0.0000
  1193 CA   MET    413      0.0071      0.0000      0.0000
  1210 CA   ASP    414      0.0057      0.0000      0.0000
  1222 CA   ARG    415      0.0031      0.0000      0.0000
  1246 CA   LEU    416      0.0023      0.0000      0.0000
  1265 CA   TYR    417      0.0015      0.0000      0.0000
  1286 CA   PHE    418      0.0015      0.0000      0.0000
  1306 CA   VAL    419      0.0016      0.0000      0.0000
  1322 CA   MET    420      0.0017      0.0000      0.0000
  1339 CA   GLU    421      0.0020      0.0000      0.0000
  1354 CA   TYR    422      0.0024      0.0000      0.0000
  1375 CA   VAL    423      0.0031      0.0000      0.0000
  1391 CA   ASN    424      0.0060      0.0000      0.0000
  1405 CA   GLY    425      0.0035      0.0000      0.0000
  1412 CA   GLY    426      0.0038      0.0000      0.0000
  1419 CA   ASP    427      0.0032      0.0000      0.0000
  1431 CA   LEU    428      0.0023      0.0000      0.0000
  1450 CA   MET    429      0.0043      0.0000      0.0000
  1467 CA   TYR    430      0.0050      0.0000      0.0000
  1488 CA   HSD    431      0.0037      0.0000      0.0000
  1505 CA   ILE    432      0.0040      0.0000      0.0000
  1524 CA   GLN    433      0.0092      0.0000      0.0000
  1541 CA   GLN    434      0.0093      0.0000      0.0000
  1558 CA   VAL    435      0.0087      0.0000      0.0000
  1574 CA   GLY    436      0.0091      0.0000      0.0000
  1581 CA   ARG    437      0.0042      0.0000      0.0000
  1605 CA   PHE    438      0.0032      0.0000      0.0000
  1625 CA   LYS    439      0.0053      0.0000      0.0000
  1647 CA   GLU    440      0.0035      0.0000      0.0000
  1664 CA   PRO    441      0.0040      0.0000      0.0000
  1676 CA   HSD    442      0.0028      0.0000      0.0000
  1693 CA   ALA    443      0.0018      0.0000      0.0000
  1703 CA   VAL    444      0.0018      0.0000      0.0000
  1719 CA   PHE    445      0.0016      0.0000      0.0000
  1739 CA   TYR    446      0.0014      0.0000      0.0000
  1760 CA   ALA    447      0.0011      0.0000      0.0000
  1770 CA   ALA    448      0.0012      0.0000      0.0000
  1780 CA   GLU    449      0.0012      0.0000      0.0000
  1795 CA   ILE    450      0.0011      0.0000      0.0000
  1814 CA   ALA    451      0.0012      0.0000      0.0000
  1824 CA   ILE    452      0.0014      0.0000      0.0000
  1843 CA   GLY    453      0.0013      0.0000      0.0000
  1850 CA   LEU    454      0.0011      0.0000      0.0000
  1869 CA   PHE    455      0.0015      0.0000      0.0000
  1889 CA   PHE    456      0.0018      0.0000      0.0000
  1909 CA   LEU    457      0.0018      0.0000      0.0000
  1928 CA   GLN    458      0.0018      0.0000      0.0000
  1945 CA   SER    459      0.0038      0.0000      0.0000
  1956 CA   LYS    460      0.0041      0.0000      0.0000
  1978 CA   GLY    461      0.0037      0.0000      0.0000
  1985 CA   ILE    462      0.0025      0.0000      0.0000
  2004 CA   ILE    463      0.0019      0.0000      0.0000
  2023 CA   TYR    464      0.0017      0.0000      0.0000
  2044 CA   ARG    465      0.0021      0.0000      0.0000
  2068 CA   ASP    466      0.0023      0.0000      0.0000
  2080 CA   LEU    467      0.0016      0.0000      0.0000
  2099 CA   LYS    468      0.0019      0.0000      0.0000
  2121 CA   LEU    469      0.0023      0.0000      0.0000
  2140 CA   ASP    470      0.0033      0.0000      0.0000
  2152 CA   ASN    471      0.0022      0.0000      0.0000
  2166 CA   VAL    472      0.0018      0.0000      0.0000
  2182 CA   MET    473      0.0022      0.0000      0.0000
  2199 CA   LEU    474      0.0022      0.0000      0.0000
  2218 CA   ASP    475      0.0033      0.0000      0.0000
  2230 CA   SER    476      0.0055      0.0000      0.0000
  2241 CA   GLU    477      0.0052      0.0000      0.0000
  2256 CA   GLY    478      0.0032      0.0000      0.0000
  2263 CA   HSD    479      0.0021      0.0000      0.0000
  2280 CA   ILE    480      0.0017      0.0000      0.0000
  2299 CA   LYS    481      0.0017      0.0000      0.0000
  2321 CA   ILE    482      0.0017      0.0000      0.0000
  2340 CA   ALA    483      0.0019      0.0000      0.0000
  2350 CA   ASP    484      0.0020      0.0000      0.0000
  2362 CA   PHE    485      0.0021      0.0000      0.0000
  2382 CA   GLY    486      0.0026      0.0000      0.0000
  2389 CA   MET    487      0.0029      0.0000      0.0000
  2406 CA   CYS    488      0.0024      0.0000      0.0000
  2417 CA   LYS    489      0.0031      0.0000      0.0000
  2439 CA   GLU    490      0.0032      0.0000      0.0000
  2454 CA   ASN    491      0.0061      0.0000      0.0000
  2468 CA   ILE    492      0.0045      0.0000      0.0000
  2487 CA   TRP    493      0.0128      0.0000      0.0000
  2511 CA   ASP    494      0.0269      0.0000      0.0000
  2523 CA   GLY    495      0.0380      0.0000      0.0000
  2530 CA   VAL    496      0.0158      0.0000      0.0000
  2546 CA   THR    497      0.0074      0.0000      0.0000
  2560 CA   THR    498      0.0063      0.0000      0.0000
  2574 CA   LYS    499      0.0072      0.0000      0.0000
  2596 CA   GLU    500      0.0073      0.0000      0.0000
  2611 CA   PHE    501      0.0061      0.0000      0.0000
  2631 CA   CYS    502      0.0058      0.0000      0.0000
  2642 CA   GLY    503      0.0038      0.0000      0.0000
  2649 CA   THR    504      0.0040      0.0000      0.0000
  2665 CA   PRO    505      0.0064      0.0000      0.0000
  2677 CA   ASP    506      0.0046      0.0000      0.0000
  2689 CA   TYR    507      0.0025      0.0000      0.0000
  2710 CA   ILE    508      0.0031      0.0000      0.0000
  2729 CA   ALA    509      0.0029      0.0000      0.0000
  2741 CA   PRO    510      0.0037      0.0000      0.0000
  2753 CA   GLU    511      0.0042      0.0000      0.0000
  2768 CA   ILE    512      0.0043      0.0000      0.0000
  2787 CA   ILE    513      0.0062      0.0000      0.0000
  2806 CA   ALA    514      0.0083      0.0000      0.0000
  2816 CA   TYR    515      0.0118      0.0000      0.0000
  2837 CA   GLN    516      0.0098      0.0000      0.0000
  2856 CA   PRO    517      0.0072      0.0000      0.0000
  2868 CA   TYR    518      0.0046      0.0000      0.0000
  2889 CA   GLY    519      0.0028      0.0000      0.0000
  2896 CA   LYS    520      0.0020      0.0000      0.0000
  2918 CA   SER    521      0.0020      0.0000      0.0000
  2929 CA   VAL    522      0.0019      0.0000      0.0000
  2945 CA   ASP    523      0.0013      0.0000      0.0000
  2957 CA   TRP    524      0.0011      0.0000      0.0000
  2981 CA   TRP    525      0.0014      0.0000      0.0000
  3005 CA   ALA    526      0.0015      0.0000      0.0000
  3015 CA   PHE    527      0.0010      0.0000      0.0000
  3035 CA   GLY    528      0.0011      0.0000      0.0000
  3042 CA   VAL    529      0.0015      0.0000      0.0000
  3058 CA   LEU    530      0.0014      0.0000      0.0000
  3077 CA   LEU    531      0.0014      0.0000      0.0000
  3096 CA   TYR    532      0.0019      0.0000      0.0000
  3117 CA   GLU    533      0.0022      0.0000      0.0000
  3132 CA   MET    534      0.0019      0.0000      0.0000
  3149 CA   LEU    535      0.0027      0.0000      0.0000
  3168 CA   ALA    536      0.0039      0.0000      0.0000
  3178 CA   GLY    537      0.0049      0.0000      0.0000
  3185 CA   GLN    538      0.0071      0.0000      0.0000
  3202 CA   ALA    539      0.0048      0.0000      0.0000
  3214 CA   PRO    540      0.0038      0.0000      0.0000
  3226 CA   PHE    541      0.0060      0.0000      0.0000
  3246 CA   GLU    542      0.0097      0.0000      0.0000
  3261 CA   GLY    543      0.0248      0.0000      0.0000
  3268 CA   GLU    544      0.0482      0.0000      0.0000
  3283 CA   ASP    545      0.0351      0.0000      0.0000
  3295 CA   GLU    546      0.0210      0.0000      0.0000
  3310 CA   ASP    547      0.0215      0.0000      0.0000
  3322 CA   GLU    548      0.0199      0.0000      0.0000
  3337 CA   LEU    549      0.0098      0.0000      0.0000
  3356 CA   PHE    550      0.0080      0.0000      0.0000
  3376 CA   GLN    551      0.0118      0.0000      0.0000
  3393 CA   SER    552      0.0093      0.0000      0.0000
  3404 CA   ILE    553      0.0052      0.0000      0.0000
  3423 CA   MET    554      0.0066      0.0000      0.0000
  3440 CA   GLU    555      0.0111      0.0000      0.0000
  3455 CA   HSD    556      0.0102      0.0000      0.0000
  3472 CA   ASN    557      0.0097      0.0000      0.0000
  3486 CA   VAL    558      0.0055      0.0000      0.0000
  3502 CA   ALA    559      0.0077      0.0000      0.0000
  3512 CA   TYR    560      0.0063      0.0000      0.0000
  3535 CA   PRO    561      0.0123      0.0000      0.0000
  3547 CA   LYS    562      0.0240      0.0000      0.0000
  3569 CA   SER    563      0.0095      0.0000      0.0000
  3580 CA   MET    564      0.0062      0.0000      0.0000
  3597 CA   SER    565      0.0083      0.0000      0.0000
  3608 CA   LYS    566      0.0099      0.0000      0.0000
  3630 CA   GLU    567      0.0048      0.0000      0.0000
  3645 CA   ALA    568      0.0034      0.0000      0.0000
  3655 CA   VAL    569      0.0043      0.0000      0.0000
  3671 CA   ALA    570      0.0044      0.0000      0.0000
  3681 CA   ILE    571      0.0021      0.0000      0.0000
  3700 CA   CYS    572      0.0021      0.0000      0.0000
  3711 CA   LYS    573      0.0032      0.0000      0.0000
  3733 CA   GLY    574      0.0029      0.0000      0.0000
  3740 CA   LEU    575      0.0015      0.0000      0.0000
  3759 CA   MET    576      0.0019      0.0000      0.0000
  3776 CA   THR    577      0.0032      0.0000      0.0000
  3790 CA   LYS    578      0.0038      0.0000      0.0000
  3812 CA   HSD    579      0.0058      0.0000      0.0000
  3831 CA   PRO    580      0.0040      0.0000      0.0000
  3843 CA   GLY    581      0.0130      0.0000      0.0000
  3850 CA   LYS    582      0.0144      0.0000      0.0000
  3872 CA   ARG    583      0.0026      0.0000      0.0000
  3896 CA   LEU    584      0.0021      0.0000      0.0000
  3915 CA   GLY    585      0.0023      0.0000      0.0000
  3922 CA   CYS    586      0.0029      0.0000      0.0000
  3933 CA   GLY    587      0.0119      0.0000      0.0000
  3942 CA   PRO    588      0.0236      0.0000      0.0000
  3954 CA   GLU    589      0.0131      0.0000      0.0000
  3969 CA   GLY    590      0.0038      0.0000      0.0000
  3976 CA   GLU    591      0.0033      0.0000      0.0000
  3991 CA   ARG    592      0.0061      0.0000      0.0000
  4015 CA   ASP    593      0.0039      0.0000      0.0000
  4027 CA   ILE    594      0.0021      0.0000      0.0000
  4046 CA   LYS    595      0.0027      0.0000      0.0000
  4068 CA   GLU    596      0.0048      0.0000      0.0000
  4083 CA   HSD    597      0.0034      0.0000      0.0000
  4100 CA   ALA    598      0.0043      0.0000      0.0000
  4110 CA   PHE    599      0.0024      0.0000      0.0000
  4130 CA   PHE    600      0.0024      0.0000      0.0000
  4150 CA   ARG    601      0.0065      0.0000      0.0000
  4174 CA   TYR    602      0.0087      0.0000      0.0000
  4195 CA   ILE    603      0.0034      0.0000      0.0000
  4214 CA   ASP    604      0.0052      0.0000      0.0000
  4226 CA   TRP    605      0.0040      0.0000      0.0000
  4250 CA   GLU    606      0.0077      0.0000      0.0000
  4265 CA   LYS    607      0.0070      0.0000      0.0000
  4287 CA   LEU    608      0.0036      0.0000      0.0000
  4306 CA   GLU    609      0.0045      0.0000      0.0000
  4321 CA   ARG    610      0.0076      0.0000      0.0000
  4345 CA   LYS    611      0.0042      0.0000      0.0000
  4367 CA   GLU    612      0.0074      0.0000      0.0000
  4382 CA   ILE    613      0.0055      0.0000      0.0000
  4401 CA   GLN    614      0.0091      0.0000      0.0000
  4420 CA   PRO    615      0.0032      0.0000      0.0000
  4434 CA   PRO    616      0.0037      0.0000      0.0000
  4446 CA   TYR    617      0.0049      0.0000      0.0000
  4467 CA   LYS    618      0.0056      0.0000      0.0000
  4491 CA   PRO    619      0.0062      0.0000      0.0000
  4503 CA   LYS    620      0.0154      0.0000      0.0000
  4525 CA   ALA    621      0.0370      0.0000      0.0000
  4535 CA   SER    622      0.0194      0.0000      0.0000
  4546 CA   GLY    623      0.0438      0.0000      0.0000
  4553 CA   ARG    624      0.0350      0.0000      0.0000
  4577 CA   ASN    625      0.0157      0.0000      0.0000
  4591 CA   ALA    626      0.0165      0.0000      0.0000
  4601 CA   GLU    627      0.0218      0.0000      0.0000
  4616 CA   ASN    628      0.0177      0.0000      0.0000
  4630 CA   PHE    629      0.0110      0.0000      0.0000
  4650 CA   ASP    630      0.0152      0.0000      0.0000
  4662 CA   ARG    631      0.0187      0.0000      0.0000
  4686 CA   PHE    632      0.0142      0.0000      0.0000
  4706 CA   PHE    633      0.0109      0.0000      0.0000
  4726 CA   THR    634      0.0158      0.0000      0.0000
  4740 CA   ARG    635      0.0155      0.0000      0.0000
  4764 CA   HSD    636      0.0142      0.0000      0.0000
  4783 CA   PRO    637      0.0120      0.0000      0.0000
  4797 CA   PRO    638      0.0084      0.0000      0.0000
  4809 CA   VAL    639      0.0080      0.0000      0.0000
  4825 CA   LEU    640      0.0065      0.0000      0.0000
  4844 CA   GLU    641      0.0130      0.0000      0.0000
  4861 CA   PRO    642      0.0215      0.0000      0.0000
  4875 CA   PRO    643      0.0157      0.0000      0.0000
  4887 CA   ASP    644      0.0224      0.0000      0.0000
  4899 CA   GLN    645      0.0285      0.0000      0.0000
  4916 CA   GLU    646      0.0376      0.0000      0.0000
  4931 CA   VAL    647      0.0208      0.0000      0.0000
  4947 CA   ILE    648      0.0152      0.0000      0.0000
  4966 CA   ARG    649      0.0315      0.0000      0.0000
  4990 CA   ASN    650      0.0317      0.0000      0.0000
  5004 CA   ILE    651      0.0124      0.0000      0.0000
  5023 CA   ASP    652      0.0138      0.0000      0.0000
  5035 CA   GLN    653      0.0104      0.0000      0.0000
  5052 CA   SER    654      0.0151      0.0000      0.0000
  5063 CA   GLU    655      0.0089      0.0000      0.0000
  5078 CA   PHE    656      0.0059      0.0000      0.0000
  5098 CA   GLU    657      0.0106      0.0000      0.0000
  5113 CA   GLY    658      0.0083      0.0000      0.0000
  5120 CA   PHE    659      0.0034      0.0000      0.0000
  5140 CA   GLU    660      0.0041      0.0000      0.0000
  5155 CA   PHE    661      0.0039      0.0000      0.0000
  5175 CA   VAL    662      0.0042      0.0000      0.0000
  5191 CA   ASN    663      0.0058      0.0000      0.0000
  5205 CA   SER    664      0.0170      0.0000      0.0000
  5216 CA   GLU    665      0.0105      0.0000      0.0000
  5231 CA   PHE    666      0.0065      0.0000      0.0000
  5251 CA   LEU    667      0.0125      0.0000      0.0000
  5270 CA   LYS    668      0.0149      0.0000      0.0000
  5294 CA   PRO    669      0.0577      0.0000      0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.