CNRS Nantes University US2B US2B
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***  TRANSCRIPTION/DNA 28-JUN-93 1GAT  ***

CA strain for 2401041811253864911

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ARG 2 0.0024
ARG 2ALA 3 -0.1509
ALA 3GLY 4 0.1456
GLY 4THR 5 -0.0602
THR 5VAL 6 0.0663
VAL 6CYS 7 0.0236
CYS 7SER 8 -0.0295
SER 8ASN 9 0.0158
ASN 9CYS 10 -0.1067
CYS 10GLN 11 0.0884
GLN 11THR 12 -0.1097
THR 12SER 13 0.1734
SER 13THR 14 -0.0271
THR 14THR 15 -0.0552
THR 15THR 16 -0.1250
THR 16LEU 17 0.0425
LEU 17TRP 18 -0.0057
TRP 18ARG 19 -0.2471
ARG 19ARG 20 -0.0159
ARG 20SER 21 -0.0298
SER 21PRO 22 -0.0450
PRO 22MET 23 0.0367
MET 23GLY 24 0.2140
GLY 24ASP 25 -0.0670
ASP 25PRO 26 0.0303
PRO 26VAL 27 -0.0379
VAL 27CYS 28 -0.0316
CYS 28ASN 29 0.0246
ASN 29ALA 30 0.0373
ALA 30CYS 31 -0.0466
CYS 31GLY 32 0.0538
GLY 32LEU 33 -0.0437
LEU 33TYR 34 0.0710
TYR 34TYR 35 -0.0062
TYR 35LYS 36 0.0802
LYS 36LEU 37 -0.1669
LEU 37HIS 38 0.0467
HIS 38GLN 39 -0.0761
GLN 39VAL 40 0.0223
VAL 40ASN 41 -0.0407
ASN 41ARG 42 -0.0161
ARG 42PRO 43 0.0060
PRO 43LEU 44 0.0213
LEU 44THR 45 0.0081
THR 45MET 46 0.0790
MET 46ARG 47 0.1746
ARG 47LYS 48 -0.0389
LYS 48ASP 49 0.0434
ASP 49GLY 50 -0.0160
GLY 50ILE 51 -0.0753
ILE 51GLN 52 0.0579
GLN 52THR 53 -0.1430
THR 53ARG 54 0.0190
ARG 54ASN 55 -0.0717
ASN 55ARG 56 0.0570
ARG 56LYS 57 -0.0362
LYS 57VAL 58 -0.0242
VAL 58SER 59 0.0258
SER 59SER 60 0.0163

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.