This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
ARG 2
0.0024
ARG 2
ALA 3
-0.1509
ALA 3
GLY 4
0.1456
GLY 4
THR 5
-0.0602
THR 5
VAL 6
0.0663
VAL 6
CYS 7
0.0236
CYS 7
SER 8
-0.0295
SER 8
ASN 9
0.0158
ASN 9
CYS 10
-0.1067
CYS 10
GLN 11
0.0884
GLN 11
THR 12
-0.1097
THR 12
SER 13
0.1734
SER 13
THR 14
-0.0271
THR 14
THR 15
-0.0552
THR 15
THR 16
-0.1250
THR 16
LEU 17
0.0425
LEU 17
TRP 18
-0.0057
TRP 18
ARG 19
-0.2471
ARG 19
ARG 20
-0.0159
ARG 20
SER 21
-0.0298
SER 21
PRO 22
-0.0450
PRO 22
MET 23
0.0367
MET 23
GLY 24
0.2140
GLY 24
ASP 25
-0.0670
ASP 25
PRO 26
0.0303
PRO 26
VAL 27
-0.0379
VAL 27
CYS 28
-0.0316
CYS 28
ASN 29
0.0246
ASN 29
ALA 30
0.0373
ALA 30
CYS 31
-0.0466
CYS 31
GLY 32
0.0538
GLY 32
LEU 33
-0.0437
LEU 33
TYR 34
0.0710
TYR 34
TYR 35
-0.0062
TYR 35
LYS 36
0.0802
LYS 36
LEU 37
-0.1669
LEU 37
HIS 38
0.0467
HIS 38
GLN 39
-0.0761
GLN 39
VAL 40
0.0223
VAL 40
ASN 41
-0.0407
ASN 41
ARG 42
-0.0161
ARG 42
PRO 43
0.0060
PRO 43
LEU 44
0.0213
LEU 44
THR 45
0.0081
THR 45
MET 46
0.0790
MET 46
ARG 47
0.1746
ARG 47
LYS 48
-0.0389
LYS 48
ASP 49
0.0434
ASP 49
GLY 50
-0.0160
GLY 50
ILE 51
-0.0753
ILE 51
GLN 52
0.0579
GLN 52
THR 53
-0.1430
THR 53
ARG 54
0.0190
ARG 54
ASN 55
-0.0717
ASN 55
ARG 56
0.0570
ARG 56
LYS 57
-0.0362
LYS 57
VAL 58
-0.0242
VAL 58
SER 59
0.0258
SER 59
SER 60
0.0163
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.