This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLN 2
-0.0110
GLN 2
ILE 3
0.0092
ILE 3
PHE 4
-0.0053
PHE 4
VAL 5
0.0227
VAL 5
LYS 6
-0.0103
LYS 6
THR 7
0.0100
THR 7
LEU 8
-0.0279
LEU 8
THR 9
0.0405
THR 9
GLY 10
-0.0257
GLY 10
LYS 11
-0.0140
LYS 11
THR 12
-0.0099
THR 12
ILE 13
-0.0233
ILE 13
THR 14
0.0121
THR 14
LEU 15
-0.0304
LEU 15
GLU 16
0.0174
GLU 16
VAL 17
-0.0365
VAL 17
GLU 18
0.0320
GLU 18
PRO 19
0.0226
PRO 19
SER 20
-0.0005
SER 20
ASP 21
0.0557
ASP 21
THR 22
-0.1956
THR 22
ILE 23
0.0464
ILE 23
GLU 24
0.1105
GLU 24
ASN 25
-0.1188
ASN 25
VAL 26
0.0224
VAL 26
LYS 27
-0.0107
LYS 27
ALA 28
-0.0206
ALA 28
LYS 29
-0.0309
LYS 29
ILE 30
0.0619
ILE 30
GLN 31
0.0043
GLN 31
ASP 32
-0.0369
ASP 32
LYS 33
-0.0062
LYS 33
GLU 34
0.0129
GLU 34
GLY 35
-0.0197
GLY 35
ILE 36
-0.0149
ILE 36
PRO 37
-0.0043
PRO 37
PRO 38
0.0339
PRO 38
ASP 39
-0.2040
ASP 39
GLN 40
0.0940
GLN 40
GLN 41
-0.0052
GLN 41
ARG 42
-0.0232
ARG 42
LEU 43
0.0269
LEU 43
ILE 44
-0.0158
ILE 44
PHE 45
0.0205
PHE 45
ALA 46
-0.0052
ALA 46
GLY 47
0.0081
GLY 47
LYS 48
0.0334
LYS 48
GLN 49
0.0361
GLN 49
LEU 50
-0.0295
LEU 50
GLU 51
-0.0028
GLU 51
ASP 52
-0.2620
ASP 52
GLY 53
0.1098
GLY 53
ARG 54
0.0024
ARG 54
THR 55
-0.1905
THR 55
LEU 56
-0.1024
LEU 56
SER 57
0.0165
SER 57
ASP 58
-0.0233
ASP 58
TYR 59
-0.0328
TYR 59
ASN 60
-0.0121
ASN 60
ILE 61
0.0128
ILE 61
GLN 62
-0.0317
GLN 62
LYS 63
-0.0079
LYS 63
GLU 64
-0.0011
GLU 64
SER 65
0.0119
SER 65
THR 66
0.0049
THR 66
LEU 67
0.0127
LEU 67
HIS 68
0.0370
HIS 68
LEU 69
0.0020
LEU 69
VAL 70
0.1023
VAL 70
LEU 71
0.0505
LEU 71
ARG 72
0.1599
ARG 72
LEU 73
0.0175
LEU 73
ARG 74
0.0109
ARG 74
GLY 75
-0.1916
GLY 75
GLY 76
-0.0215
GLY 76
MET 77
-0.0421
MET 77
GLN 78
-0.0329
GLN 78
ILE 79
0.0611
ILE 79
PHE 80
-0.0113
PHE 80
VAL 81
0.0140
VAL 81
LYS 82
0.0008
LYS 82
THR 83
-0.0044
THR 83
LEU 84
0.0399
LEU 84
THR 85
0.0027
THR 85
GLY 86
-0.0476
GLY 86
LYS 87
0.1310
LYS 87
THR 88
0.0229
THR 88
ILE 89
0.1045
ILE 89
THR 90
-0.0345
THR 90
LEU 91
0.0061
LEU 91
GLU 92
-0.0330
GLU 92
VAL 93
-0.1463
VAL 93
GLU 94
-0.0225
GLU 94
PRO 95
-0.0310
PRO 95
SER 96
-0.0010
SER 96
ASP 97
-0.0178
ASP 97
THR 98
0.0070
THR 98
ILE 99
0.0522
ILE 99
GLU 100
0.0163
GLU 100
ASN 101
0.0088
ASN 101
VAL 102
0.0517
VAL 102
LYS 103
0.0755
LYS 103
ALA 104
-0.0859
ALA 104
LYS 105
0.0920
LYS 105
ILE 106
0.0128
ILE 106
GLN 107
0.1232
GLN 107
ASP 108
-0.2900
ASP 108
LYS 109
0.3005
LYS 109
GLU 110
-0.0157
GLU 110
GLY 111
-0.0213
GLY 111
ILE 112
-0.0190
ILE 112
PRO 113
-0.0259
PRO 113
PRO 114
0.0552
PRO 114
ASP 115
-0.0171
ASP 115
GLN 116
0.0225
GLN 116
GLN 117
0.0090
GLN 117
ARG 118
-0.0849
ARG 118
LEU 119
0.0352
LEU 119
ILE 120
-0.0279
ILE 120
PHE 121
-0.0273
PHE 121
ALA 122
0.0109
ALA 122
GLY 123
0.0010
GLY 123
LYS 124
-0.0209
LYS 124
GLN 125
-0.0134
GLN 125
LEU 126
0.0010
LEU 126
GLU 127
0.0232
GLU 127
ASP 128
-0.0317
ASP 128
GLY 129
0.0275
GLY 129
ARG 130
-0.0009
ARG 130
THR 131
0.0060
THR 131
LEU 132
0.0095
LEU 132
SER 133
-0.0194
SER 133
ASP 134
-0.0030
ASP 134
TYR 135
-0.0011
TYR 135
ASN 136
0.0189
ASN 136
ILE 137
-0.0180
ILE 137
GLN 138
0.0315
GLN 138
LYS 139
0.0961
LYS 139
GLU 140
-0.0272
GLU 140
SER 141
0.1086
SER 141
THR 142
-0.0176
THR 142
LEU 143
0.0192
LEU 143
HIS 144
-0.0154
HIS 144
LEU 145
-0.0099
LEU 145
VAL 146
-0.0081
VAL 146
LEU 147
-0.0281
LEU 147
ARG 148
-0.0257
ARG 148
LEU 149
-0.0132
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.