This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLN 2
-0.0035
GLN 2
ILE 3
-0.0015
ILE 3
PHE 4
-0.0070
PHE 4
VAL 5
-0.0381
VAL 5
LYS 6
-0.0033
LYS 6
THR 7
-0.0284
THR 7
LEU 8
0.0355
LEU 8
THR 9
-0.0058
THR 9
GLY 10
-0.0299
GLY 10
LYS 11
0.0258
LYS 11
THR 12
0.0373
THR 12
ILE 13
0.0040
ILE 13
THR 14
0.0017
THR 14
LEU 15
0.0285
LEU 15
GLU 16
-0.0177
GLU 16
VAL 17
0.0149
VAL 17
GLU 18
-0.0108
GLU 18
PRO 19
-0.0150
PRO 19
SER 20
0.0039
SER 20
ASP 21
-0.0187
ASP 21
THR 22
0.0590
THR 22
ILE 23
-0.0182
ILE 23
GLU 24
-0.0478
GLU 24
ASN 25
0.0369
ASN 25
VAL 26
0.0060
VAL 26
LYS 27
-0.0216
LYS 27
ALA 28
0.0117
ALA 28
LYS 29
0.0077
LYS 29
ILE 30
-0.0432
ILE 30
GLN 31
-0.0054
GLN 31
ASP 32
0.0122
ASP 32
LYS 33
0.0085
LYS 33
GLU 34
-0.0063
GLU 34
GLY 35
0.0068
GLY 35
ILE 36
0.0356
ILE 36
PRO 37
-0.0235
PRO 37
PRO 38
0.0173
PRO 38
ASP 39
-0.0162
ASP 39
GLN 40
0.0155
GLN 40
GLN 41
-0.0343
GLN 41
ARG 42
0.0001
ARG 42
LEU 43
-0.0648
LEU 43
ILE 44
-0.0053
ILE 44
PHE 45
-0.0443
PHE 45
ALA 46
0.0050
ALA 46
GLY 47
0.0051
GLY 47
LYS 48
-0.0166
LYS 48
GLN 49
-0.0006
GLN 49
LEU 50
-0.0153
LEU 50
GLU 51
0.0502
GLU 51
ASP 52
0.0569
ASP 52
GLY 53
0.0315
GLY 53
ARG 54
0.0903
ARG 54
THR 55
0.0262
THR 55
LEU 56
0.0329
LEU 56
SER 57
-0.0031
SER 57
ASP 58
-0.0024
ASP 58
TYR 59
-0.0053
TYR 59
ASN 60
0.0116
ASN 60
ILE 61
-0.0064
ILE 61
GLN 62
0.0204
GLN 62
LYS 63
0.0098
LYS 63
GLU 64
-0.0061
GLU 64
SER 65
0.0147
SER 65
THR 66
-0.0561
THR 66
LEU 67
-0.0079
LEU 67
HIS 68
-0.0591
HIS 68
LEU 69
-0.0047
LEU 69
VAL 70
-0.0711
VAL 70
LEU 71
-0.0144
LEU 71
ARG 72
-0.1005
ARG 72
LEU 73
-0.0209
LEU 73
ARG 74
0.1115
ARG 74
GLY 75
-0.1847
GLY 75
GLY 76
-0.0473
GLY 76
MET 77
0.0231
MET 77
GLN 78
-0.0887
GLN 78
ILE 79
0.0316
ILE 79
PHE 80
-0.2659
PHE 80
VAL 81
-0.0226
VAL 81
LYS 82
0.0650
LYS 82
THR 83
0.0222
THR 83
LEU 84
0.0334
LEU 84
THR 85
-0.0021
THR 85
GLY 86
-0.1296
GLY 86
LYS 87
0.1434
LYS 87
THR 88
-0.1324
THR 88
ILE 89
-0.0074
ILE 89
THR 90
0.1509
THR 90
LEU 91
-0.0414
LEU 91
GLU 92
0.1695
GLU 92
VAL 93
0.0487
VAL 93
GLU 94
0.0521
GLU 94
PRO 95
0.0591
PRO 95
SER 96
-0.0667
SER 96
ASP 97
0.1237
ASP 97
THR 98
-0.1075
THR 98
ILE 99
0.0169
ILE 99
GLU 100
-0.0004
GLU 100
ASN 101
-0.0630
ASN 101
VAL 102
-0.0550
VAL 102
LYS 103
0.0825
LYS 103
ALA 104
-0.0586
ALA 104
LYS 105
0.0001
LYS 105
ILE 106
0.0720
ILE 106
GLN 107
-0.0102
GLN 107
ASP 108
0.0048
ASP 108
LYS 109
0.0863
LYS 109
GLU 110
-0.1517
GLU 110
GLY 111
0.2975
GLY 111
ILE 112
-0.0266
ILE 112
PRO 113
0.1234
PRO 113
PRO 114
-0.0339
PRO 114
ASP 115
0.1861
ASP 115
GLN 116
0.0237
GLN 116
GLN 117
-0.0216
GLN 117
ARG 118
-0.3610
ARG 118
LEU 119
-0.0998
LEU 119
ILE 120
-0.1131
ILE 120
PHE 121
-0.0914
PHE 121
ALA 122
0.0893
ALA 122
GLY 123
0.0355
GLY 123
LYS 124
-0.1458
LYS 124
GLN 125
-0.0180
GLN 125
LEU 126
-0.0228
LEU 126
GLU 127
-0.0213
GLU 127
ASP 128
-0.0986
ASP 128
GLY 129
0.1971
GLY 129
ARG 130
-0.0131
ARG 130
THR 131
-0.0207
THR 131
LEU 132
-0.0364
LEU 132
SER 133
0.0280
SER 133
ASP 134
0.0423
ASP 134
TYR 135
-0.1392
TYR 135
ASN 136
0.1894
ASN 136
ILE 137
-0.0201
ILE 137
GLN 138
0.0935
GLN 138
LYS 139
0.2133
LYS 139
GLU 140
-0.1336
GLU 140
SER 141
0.2091
SER 141
THR 142
-0.6057
THR 142
LEU 143
0.0962
LEU 143
HIS 144
-0.2427
HIS 144
LEU 145
0.1517
LEU 145
VAL 146
-0.3482
VAL 146
LEU 147
-0.0578
LEU 147
ARG 148
-0.2194
ARG 148
LEU 149
-0.0204
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.