This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLN 2
0.0325
GLN 2
ILE 3
-0.1123
ILE 3
PHE 4
-0.0119
PHE 4
VAL 5
0.0669
VAL 5
LYS 6
-0.0368
LYS 6
THR 7
0.1504
THR 7
LEU 8
-0.1300
LEU 8
THR 9
0.0030
THR 9
GLY 10
-0.3813
GLY 10
LYS 11
0.5046
LYS 11
THR 12
-0.1799
THR 12
ILE 13
0.0681
ILE 13
THR 14
0.1163
THR 14
LEU 15
0.0188
LEU 15
GLU 16
-0.0034
GLU 16
VAL 17
-0.0594
VAL 17
GLU 18
-0.2642
GLU 18
PRO 19
-0.2960
PRO 19
SER 20
0.2851
SER 20
ASP 21
-0.2894
ASP 21
THR 22
0.5683
THR 22
ILE 23
0.0211
ILE 23
GLU 24
-0.0621
GLU 24
ASN 25
0.2731
ASN 25
VAL 26
0.1420
VAL 26
LYS 27
0.1221
LYS 27
ALA 28
0.0202
ALA 28
LYS 29
0.3162
LYS 29
ILE 30
-0.2185
ILE 30
GLN 31
0.0861
GLN 31
ASP 32
0.1550
ASP 32
LYS 33
0.1735
LYS 33
GLU 34
0.0467
GLU 34
GLY 35
0.3306
GLY 35
ILE 36
0.2949
ILE 36
PRO 37
-0.1693
PRO 37
PRO 38
0.0495
PRO 38
ASP 39
0.0405
ASP 39
GLN 40
-0.0151
GLN 40
GLN 41
0.1679
GLN 41
ARG 42
0.5298
ARG 42
LEU 43
0.1749
LEU 43
ILE 44
0.1311
ILE 44
PHE 45
0.5340
PHE 45
ALA 46
-0.0466
ALA 46
GLY 47
-0.1526
GLY 47
LYS 48
0.1955
LYS 48
GLN 49
0.5186
GLN 49
LEU 50
0.1435
LEU 50
GLU 51
-0.2301
GLU 51
ASP 52
-0.0017
ASP 52
GLY 53
-0.0939
GLY 53
ARG 54
-0.0380
ARG 54
THR 55
0.1290
THR 55
LEU 56
0.1458
LEU 56
SER 57
-0.0627
SER 57
ASP 58
-0.0042
ASP 58
TYR 59
0.1832
TYR 59
ASN 60
0.0301
ASN 60
ILE 61
-0.1144
ILE 61
GLN 62
0.1638
GLN 62
LYS 63
-0.1148
LYS 63
GLU 64
0.1487
GLU 64
SER 65
-0.1697
SER 65
THR 66
-0.0805
THR 66
LEU 67
0.0035
LEU 67
HIS 68
0.2880
HIS 68
LEU 69
0.4193
LEU 69
VAL 70
-0.0542
VAL 70
LEU 71
0.3267
LEU 71
ARG 72
0.2857
ARG 72
LEU 73
0.0358
LEU 73
ARG 74
-0.0706
ARG 74
GLY 75
0.2386
GLY 75
GLY 76
0.3415
GLY 76
MET 77
-0.1169
MET 77
GLN 78
-0.0866
GLN 78
ILE 79
0.0276
ILE 79
PHE 80
0.0032
PHE 80
VAL 81
0.0957
VAL 81
LYS 82
-0.0313
LYS 82
THR 83
0.0894
THR 83
LEU 84
-0.0777
LEU 84
THR 85
0.0519
THR 85
GLY 86
-0.3448
GLY 86
LYS 87
0.1931
LYS 87
THR 88
0.0240
THR 88
ILE 89
0.0688
ILE 89
THR 90
0.0207
THR 90
LEU 91
0.0061
LEU 91
GLU 92
-0.2758
GLU 92
VAL 93
-0.1174
VAL 93
GLU 94
-0.0797
GLU 94
PRO 95
-0.1205
PRO 95
SER 96
0.0052
SER 96
ASP 97
-0.0987
ASP 97
THR 98
-0.0123
THR 98
ILE 99
0.0354
ILE 99
GLU 100
-0.0277
GLU 100
ASN 101
0.0364
ASN 101
VAL 102
0.1822
VAL 102
LYS 103
-0.1065
LYS 103
ALA 104
0.0272
ALA 104
LYS 105
0.1067
LYS 105
ILE 106
-0.2081
ILE 106
GLN 107
0.1288
GLN 107
ASP 108
0.0460
ASP 108
LYS 109
0.1354
LYS 109
GLU 110
-0.0510
GLU 110
GLY 111
0.0875
GLY 111
ILE 112
0.2010
ILE 112
PRO 113
-0.1000
PRO 113
PRO 114
0.1007
PRO 114
ASP 115
-0.0942
ASP 115
GLN 116
0.0763
GLN 116
GLN 117
-0.0112
GLN 117
ARG 118
0.0579
ARG 118
LEU 119
-0.0410
LEU 119
ILE 120
-0.0086
ILE 120
PHE 121
0.0374
PHE 121
ALA 122
-0.0185
ALA 122
GLY 123
0.0138
GLY 123
LYS 124
-0.0363
LYS 124
GLN 125
0.0611
GLN 125
LEU 126
-0.0608
LEU 126
GLU 127
0.0058
GLU 127
ASP 128
-0.0146
ASP 128
GLY 129
0.1502
GLY 129
ARG 130
0.0291
ARG 130
THR 131
-0.1147
THR 131
LEU 132
-0.0086
LEU 132
SER 133
-0.0812
SER 133
ASP 134
-0.0552
ASP 134
TYR 135
0.1756
TYR 135
ASN 136
-0.1586
ASN 136
ILE 137
-0.0440
ILE 137
GLN 138
-0.1476
GLN 138
LYS 139
-0.5690
LYS 139
GLU 140
-0.0042
GLU 140
SER 141
0.0775
SER 141
THR 142
0.0025
THR 142
LEU 143
0.0083
LEU 143
HIS 144
0.0099
HIS 144
LEU 145
-0.0198
LEU 145
VAL 146
-0.1053
VAL 146
LEU 147
-0.1009
LEU 147
ARG 148
-0.0016
ARG 148
LEU 149
-0.0289
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.