CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225123556539

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 -0.0279
GLN 1ILE 2 0.0543
ILE 2PRO 3 -0.1624
PRO 3LEU 4 0.0993
LEU 4CYS 5 0.0600
CYS 5ALA 6 0.0105
ALA 6ASN 7 -0.1904
ASN 7LEU 8 -0.1057
LEU 8VAL 9 -0.0330
VAL 9PRO 10 0.3745
PRO 10VAL 11 -0.0643
VAL 11PRO 12 0.0645
PRO 12ILE 13 0.0226
ILE 13THR 14 -0.0736
THR 14ASN 15 -0.0534
ASN 15ALA 16 0.0660
ALA 16THR 17 -0.0524
THR 17LEU 18 0.0754
LEU 18ASP 19 -0.0121
ASP 19ARG 20 0.1523
ARG 20ILE 21 0.0086
ILE 21THR 22 -0.0131
THR 22GLY 23 -0.0465
GLY 23LYS 24 0.0019
LYS 24TRP 25 -0.0187
TRP 25PHE 26 0.0321
PHE 26TYR 27 0.0675
TYR 27ILE 28 -0.0367
ILE 28ALA 29 0.0893
ALA 29SER 30 0.0344
SER 30ALA 31 0.1093
ALA 31PHE 32 0.0022
PHE 32ARG 33 0.0248
ARG 33ASN 34 0.0628
ASN 34GLU 35 -0.0261
GLU 35GLU 36 0.0340
GLU 36TYR 37 -0.0365
TYR 37ASN 38 -0.3591
ASN 38LYS 39 0.0932
LYS 39SER 40 -0.0035
SER 40VAL 41 -0.1599
VAL 41GLN 42 0.0099
GLN 42GLU 43 0.0234
GLU 43ILE 44 -0.1281
ILE 44GLN 45 0.2452
GLN 45ALA 46 -0.0032
ALA 46THR 47 -0.0372
THR 47PHE 48 0.0307
PHE 48PHE 49 -0.0182
PHE 49TYR 50 0.0026
TYR 50PHE 51 -0.0167
PHE 51THR 52 0.0012
THR 52PRO 53 -0.0267
PRO 53ASN 54 0.0776
ASN 54LYS 55 -0.0288
LYS 55THR 56 0.0691
THR 56GLU 57 -0.0348
GLU 57ASP 58 -0.0074
ASP 58THR 59 0.0475
THR 59ILE 60 0.0063
ILE 60PHE 61 0.0149
PHE 61LEU 62 -0.0470
LEU 62ARG 63 0.0568
ARG 63GLU 64 -0.1094
GLU 64TYR 65 0.0451
TYR 65GLN 66 -0.0746
GLN 66THR 67 -0.0772
THR 67ARG 68 0.0243
ARG 68GLN 69 0.0056
GLN 69ASN 70 0.0903
ASN 70GLN 71 -0.0185
GLN 71CYS 72 0.0137
CYS 72PHE 73 -0.0217
PHE 73TYR 74 -0.1714
TYR 74ASN 75 0.0660
ASN 75SER 76 -0.0890
SER 76SER 77 0.1322
SER 77TYR 78 0.0453
TYR 78LEU 79 0.0164
LEU 79ASN 80 0.0934
ASN 80VAL 81 0.0559
VAL 81GLN 82 0.0548
GLN 82ARG 83 -0.0554
ARG 83GLU 84 -0.0080
GLU 84ASN 85 -0.0506
ASN 85GLY 86 0.0145
GLY 86THR 87 0.0741
THR 87VAL 88 0.0784
VAL 88SER 89 0.0731
SER 89ARG 90 0.0484
ARG 90TYR 91 0.0709
TYR 91GLU 92 -0.0088
GLU 92GLY 93 -0.0690
GLY 93GLY 94 0.0399
GLY 94ARG 95 0.0056
ARG 95GLU 96 0.0828
GLU 96HIS 97 -0.1267
HIS 97VAL 98 0.1939
VAL 98ALA 99 0.0745
ALA 99HIS 100 0.2244
HIS 100LEU 101 -0.1480
LEU 101LEU 102 0.1090
LEU 102PHE 103 -0.0127
PHE 103LEU 104 0.1577
LEU 104ARG 105 0.0743
ARG 105ASP 106 -0.1284
ASP 106THR 107 0.1924
THR 107LYS 108 -0.0777
LYS 108THR 109 0.0059
THR 109LEU 110 0.0505
LEU 110MET 111 -0.0197
MET 111PHE 112 -0.0199
PHE 112GLY 113 0.0778
GLY 113SER 114 -0.0897
SER 114TYR 115 0.0611
TYR 115LEU 116 0.0070
LEU 116ASP 117 -0.0157
ASP 117ASP 118 -0.0115
ASP 118GLU 119 -0.0197
GLU 119LYS 120 0.0417
LYS 120ASN 121 0.0021
ASN 121TRP 122 0.0055
TRP 122GLY 123 0.0377
GLY 123LEU 124 0.0345
LEU 124SER 125 0.1094
SER 125PHE 126 0.0172
PHE 126TYR 127 0.0212
TYR 127ALA 128 0.0036
ALA 128ASP 129 0.0630
ASP 129LYS 130 0.0122
LYS 130PRO 131 -0.0405
PRO 131GLU 132 -0.0659
GLU 132THR 133 -0.3525
THR 133THR 134 -0.0722
THR 134LYS 135 -0.0357
LYS 135GLU 136 0.0379
GLU 136GLN 137 0.0475
GLN 137LEU 138 0.1225
LEU 138GLY 139 -0.1301
GLY 139GLU 140 0.1562
GLU 140PHE 141 -0.0312
PHE 141TYR 142 0.0532
TYR 142GLU 143 -0.1826
GLU 143ALA 144 0.0626
ALA 144LEU 145 0.0116
LEU 145ASP 146 0.0421
ASP 146CYS 147 0.0215
CYS 147LEU 148 0.1135
LEU 148ARG 149 0.0011
ARG 149ILE 150 0.0723
ILE 150PRO 151 -0.0387
PRO 151ARG 152 -0.0197
ARG 152SER 153 0.0732
SER 153ASP 154 -0.0872
ASP 154VAL 155 0.0444
VAL 155MET 156 0.0635
MET 156TYR 157 0.0510
TYR 157THR 158 -0.0741
THR 158ASP 159 -0.0320
ASP 159TRP 160 0.1102
TRP 160LYS 161 -0.0155
LYS 161LYS 162 -0.0772
LYS 162ASP 163 0.1390
ASP 163LYS 164 -0.1539
LYS 164CYS 165 0.0571
CYS 165GLU 166 0.1143
GLU 166PRO 167 -0.1516
PRO 167LEU 168 0.0493
LEU 168GLU 169 -0.0092
GLU 169LYS 170 -0.0575
LYS 170GLN 171 -0.0606
GLN 171HIS 172 0.0669
HIS 172GLU 173 -0.1079
GLU 173LYS 174 0.0252
LYS 174GLU 175 0.0347
GLU 175ARG 176 0.0256
ARG 176LYS 177 -0.0360
LYS 177GLN 178 0.1768

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.