CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225123556539

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 0.0671
GLN 1ILE 2 -0.0674
ILE 2PRO 3 0.2207
PRO 3LEU 4 -0.1089
LEU 4CYS 5 -0.0014
CYS 5ALA 6 -0.0295
ALA 6ASN 7 0.3080
ASN 7LEU 8 -0.1394
LEU 8VAL 9 0.2260
VAL 9PRO 10 -0.0857
PRO 10VAL 11 0.0613
VAL 11PRO 12 0.1012
PRO 12ILE 13 -0.0273
ILE 13THR 14 0.0426
THR 14ASN 15 0.0739
ASN 15ALA 16 -0.0047
ALA 16THR 17 0.0990
THR 17LEU 18 -0.0248
LEU 18ASP 19 0.0387
ASP 19ARG 20 0.0371
ARG 20ILE 21 -0.0101
ILE 21THR 22 0.0844
THR 22GLY 23 -0.1875
GLY 23LYS 24 -0.1199
LYS 24TRP 25 0.0001
TRP 25PHE 26 -0.0649
PHE 26TYR 27 -0.0313
TYR 27ILE 28 0.0359
ILE 28ALA 29 -0.1127
ALA 29SER 30 -0.0288
SER 30ALA 31 -0.0201
ALA 31PHE 32 -0.0387
PHE 32ARG 33 -0.0208
ARG 33ASN 34 -0.0806
ASN 34GLU 35 0.0171
GLU 35GLU 36 0.0265
GLU 36TYR 37 0.0199
TYR 37ASN 38 -0.1373
ASN 38LYS 39 0.0790
LYS 39SER 40 0.0808
SER 40VAL 41 -0.0657
VAL 41GLN 42 -0.0265
GLN 42GLU 43 0.1419
GLU 43ILE 44 -0.0714
ILE 44GLN 45 0.0125
GLN 45ALA 46 -0.0261
ALA 46THR 47 -0.1362
THR 47PHE 48 -0.0499
PHE 48PHE 49 -0.0872
PHE 49TYR 50 -0.0531
TYR 50PHE 51 -0.0932
PHE 51THR 52 0.0213
THR 52PRO 53 -0.2350
PRO 53ASN 54 -0.0230
ASN 54LYS 55 -0.0608
LYS 55THR 56 0.0028
THR 56GLU 57 0.0460
GLU 57ASP 58 0.0360
ASP 58THR 59 -0.1350
THR 59ILE 60 -0.0707
ILE 60PHE 61 -0.1168
PHE 61LEU 62 -0.1428
LEU 62ARG 63 -0.0226
ARG 63GLU 64 -0.1774
GLU 64TYR 65 -0.0464
TYR 65GLN 66 -0.0521
GLN 66THR 67 -0.1672
THR 67ARG 68 0.0252
ARG 68GLN 69 -0.0043
GLN 69ASN 70 0.0832
ASN 70GLN 71 -0.0870
GLN 71CYS 72 -0.0566
CYS 72PHE 73 -0.0446
PHE 73TYR 74 -0.2396
TYR 74ASN 75 -0.0668
ASN 75SER 76 -0.3055
SER 76SER 77 0.0860
SER 77TYR 78 -0.1671
TYR 78LEU 79 0.0388
LEU 79ASN 80 -0.0664
ASN 80VAL 81 -0.0046
VAL 81GLN 82 -0.0486
GLN 82ARG 83 -0.0332
ARG 83GLU 84 -0.0048
GLU 84ASN 85 0.0529
ASN 85GLY 86 -0.0679
GLY 86THR 87 -0.0921
THR 87VAL 88 0.0037
VAL 88SER 89 -0.1099
SER 89ARG 90 -0.0232
ARG 90TYR 91 0.0236
TYR 91GLU 92 0.0095
GLU 92GLY 93 0.0638
GLY 93GLY 94 0.0086
GLY 94ARG 95 -0.0591
ARG 95GLU 96 -0.0800
GLU 96HIS 97 -0.0196
HIS 97VAL 98 -0.3413
VAL 98ALA 99 -0.1662
ALA 99HIS 100 -0.2464
HIS 100LEU 101 0.2687
LEU 101LEU 102 -0.0111
LEU 102PHE 103 -0.0954
PHE 103LEU 104 -0.0961
LEU 104ARG 105 -0.0939
ARG 105ASP 106 0.0834
ASP 106THR 107 -0.1259
THR 107LYS 108 0.0690
LYS 108THR 109 0.0168
THR 109LEU 110 -0.0512
LEU 110MET 111 0.0369
MET 111PHE 112 0.0061
PHE 112GLY 113 0.2044
GLY 113SER 114 -0.0947
SER 114TYR 115 0.1334
TYR 115LEU 116 -0.3678
LEU 116ASP 117 -0.0460
ASP 117ASP 118 0.1823
ASP 118GLU 119 -0.0428
GLU 119LYS 120 -0.0536
LYS 120ASN 121 -0.0043
ASN 121TRP 122 -0.0490
TRP 122GLY 123 0.0038
GLY 123LEU 124 0.0094
LEU 124SER 125 0.0379
SER 125PHE 126 0.0126
PHE 126TYR 127 0.0079
TYR 127ALA 128 0.0055
ALA 128ASP 129 -0.0546
ASP 129LYS 130 0.0303
LYS 130PRO 131 0.0753
PRO 131GLU 132 0.0081
GLU 132THR 133 0.1362
THR 133THR 134 0.1041
THR 134LYS 135 0.0029
LYS 135GLU 136 -0.0077
GLU 136GLN 137 -0.0488
GLN 137LEU 138 -0.1135
LEU 138GLY 139 0.0785
GLY 139GLU 140 -0.0242
GLU 140PHE 141 0.0733
PHE 141TYR 142 -0.0073
TYR 142GLU 143 0.5091
GLU 143ALA 144 -0.0396
ALA 144LEU 145 0.1197
LEU 145ASP 146 0.0448
ASP 146CYS 147 0.0385
CYS 147LEU 148 -0.3178
LEU 148ARG 149 0.1773
ARG 149ILE 150 -0.1468
ILE 150PRO 151 0.0350
PRO 151ARG 152 -0.2031
ARG 152SER 153 0.0845
SER 153ASP 154 0.1206
ASP 154VAL 155 -0.1009
VAL 155MET 156 0.2139
MET 156TYR 157 -0.1336
TYR 157THR 158 -0.0339
THR 158ASP 159 -0.0553
ASP 159TRP 160 0.0128
TRP 160LYS 161 0.0049
LYS 161LYS 162 0.0328
LYS 162ASP 163 0.0277
ASP 163LYS 164 -0.0192
LYS 164CYS 165 -0.0011
CYS 165GLU 166 0.1056
GLU 166PRO 167 -0.0943
PRO 167LEU 168 -0.0492
LEU 168GLU 169 -0.0053
GLU 169LYS 170 -0.0384
LYS 170GLN 171 -0.0891
GLN 171HIS 172 0.0381
HIS 172GLU 173 -0.0859
GLU 173LYS 174 0.0478
LYS 174GLU 175 0.0054
GLU 175ARG 176 -0.0667
ARG 176LYS 177 -0.1181
LYS 177GLN 178 0.1713

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.