CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225123556539

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 0.0055
GLN 1ILE 2 -0.0122
ILE 2PRO 3 0.0308
PRO 3LEU 4 -0.0395
LEU 4CYS 5 -0.0116
CYS 5ALA 6 -0.0091
ALA 6ASN 7 0.0733
ASN 7LEU 8 0.0138
LEU 8VAL 9 0.0120
VAL 9PRO 10 -0.0834
PRO 10VAL 11 0.0231
VAL 11PRO 12 -0.0053
PRO 12ILE 13 -0.0021
ILE 13THR 14 0.0128
THR 14ASN 15 0.0243
ASN 15ALA 16 -0.0180
ALA 16THR 17 0.0155
THR 17LEU 18 -0.0030
LEU 18ASP 19 -0.0012
ASP 19ARG 20 -0.0086
ARG 20ILE 21 0.0170
ILE 21THR 22 0.0249
THR 22GLY 23 0.0275
GLY 23LYS 24 -0.0977
LYS 24TRP 25 0.0507
TRP 25PHE 26 -0.0543
PHE 26TYR 27 0.0455
TYR 27ILE 28 -0.0102
ILE 28ALA 29 0.0466
ALA 29SER 30 0.0175
SER 30ALA 31 0.0035
ALA 31PHE 32 0.0245
PHE 32ARG 33 0.0091
ARG 33ASN 34 -0.0218
ASN 34GLU 35 -0.0123
GLU 35GLU 36 -0.0095
GLU 36TYR 37 -0.0020
TYR 37ASN 38 0.0948
ASN 38LYS 39 -0.0305
LYS 39SER 40 -0.0715
SER 40VAL 41 0.0255
VAL 41GLN 42 0.0399
GLN 42GLU 43 -0.1090
GLU 43ILE 44 0.0422
ILE 44GLN 45 0.0042
GLN 45ALA 46 0.0214
ALA 46THR 47 0.0178
THR 47PHE 48 0.0665
PHE 48PHE 49 -0.0144
PHE 49TYR 50 0.0017
TYR 50PHE 51 0.0112
PHE 51THR 52 -0.0344
THR 52PRO 53 0.0597
PRO 53ASN 54 -0.0482
ASN 54LYS 55 0.0308
LYS 55THR 56 -0.0261
THR 56GLU 57 0.0081
GLU 57ASP 58 0.0084
ASP 58THR 59 -0.0003
THR 59ILE 60 -0.0028
ILE 60PHE 61 -0.0157
PHE 61LEU 62 0.0602
LEU 62ARG 63 -0.0633
ARG 63GLU 64 0.0485
GLU 64TYR 65 0.0203
TYR 65GLN 66 -0.0720
GLN 66THR 67 0.0535
THR 67ARG 68 0.0166
ARG 68GLN 69 0.0227
GLN 69ASN 70 -0.0237
ASN 70GLN 71 0.0289
GLN 71CYS 72 -0.0802
CYS 72PHE 73 0.0632
PHE 73TYR 74 -0.1388
TYR 74ASN 75 0.0024
ASN 75SER 76 0.1527
SER 76SER 77 -0.1339
SER 77TYR 78 0.0279
TYR 78LEU 79 -0.0334
LEU 79ASN 80 -0.0237
ASN 80VAL 81 -0.0199
VAL 81GLN 82 -0.0144
GLN 82ARG 83 0.0141
ARG 83GLU 84 0.0047
GLU 84ASN 85 0.0144
ASN 85GLY 86 -0.0035
GLY 86THR 87 -0.0136
THR 87VAL 88 -0.0288
VAL 88SER 89 0.0061
SER 89ARG 90 -0.0024
ARG 90TYR 91 0.0169
TYR 91GLU 92 -0.0257
GLU 92GLY 93 0.0093
GLY 93GLY 94 -0.0051
GLY 94ARG 95 0.0089
ARG 95GLU 96 -0.0063
GLU 96HIS 97 0.0271
HIS 97VAL 98 -0.0009
VAL 98ALA 99 0.0281
ALA 99HIS 100 -0.0450
HIS 100LEU 101 0.0137
LEU 101LEU 102 -0.0203
LEU 102PHE 103 -0.0270
PHE 103LEU 104 -0.0351
LEU 104ARG 105 -0.0294
ARG 105ASP 106 0.0249
ASP 106THR 107 -0.0200
THR 107LYS 108 -0.0125
LYS 108THR 109 -0.0218
THR 109LEU 110 -0.0203
LEU 110MET 111 0.0185
MET 111PHE 112 -0.0004
PHE 112GLY 113 -0.0378
GLY 113SER 114 0.0264
SER 114TYR 115 -0.0124
TYR 115LEU 116 0.0230
LEU 116ASP 117 0.0059
ASP 117ASP 118 -0.0066
ASP 118GLU 119 0.0060
GLU 119LYS 120 -0.0057
LYS 120ASN 121 -0.0051
ASN 121TRP 122 0.0076
TRP 122GLY 123 0.0040
GLY 123LEU 124 0.0086
LEU 124SER 125 -0.0105
SER 125PHE 126 -0.0041
PHE 126TYR 127 0.0261
TYR 127ALA 128 -0.0058
ALA 128ASP 129 0.0323
ASP 129LYS 130 -0.0134
LYS 130PRO 131 -0.0769
PRO 131GLU 132 0.0601
GLU 132THR 133 0.0802
THR 133THR 134 0.0278
THR 134LYS 135 0.0186
LYS 135GLU 136 -0.0104
GLU 136GLN 137 0.0050
GLN 137LEU 138 -0.0023
LEU 138GLY 139 0.0344
GLY 139GLU 140 -0.0326
GLU 140PHE 141 -0.0197
PHE 141TYR 142 0.0033
TYR 142GLU 143 -0.0159
GLU 143ALA 144 -0.0198
ALA 144LEU 145 -0.0083
LEU 145ASP 146 -0.0209
ASP 146CYS 147 -0.0123
CYS 147LEU 148 -0.0231
LEU 148ARG 149 -0.0103
ARG 149ILE 150 -0.0196
ILE 150PRO 151 -0.0001
PRO 151ARG 152 0.0321
ARG 152SER 153 -0.0078
SER 153ASP 154 0.0028
ASP 154VAL 155 0.0207
VAL 155MET 156 -0.0987
MET 156TYR 157 0.0902
TYR 157THR 158 0.0288
THR 158ASP 159 0.0301
ASP 159TRP 160 0.0781
TRP 160LYS 161 -0.0057
LYS 161LYS 162 -0.0212
LYS 162ASP 163 0.0272
ASP 163LYS 164 -0.0309
LYS 164CYS 165 -0.0158
CYS 165GLU 166 0.0084
GLU 166PRO 167 0.0250
PRO 167LEU 168 0.0518
LEU 168GLU 169 0.0667
GLU 169LYS 170 -0.0144
LYS 170GLN 171 0.0651
GLN 171HIS 172 0.0298
HIS 172GLU 173 -0.1338
GLU 173LYS 174 0.1200
LYS 174GLU 175 0.0316
GLU 175ARG 176 0.0581
ARG 176LYS 177 -0.0019
LYS 177GLN 178 0.0834

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.