CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225123556539

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 -0.0151
GLN 1ILE 2 0.0009
ILE 2PRO 3 0.0075
PRO 3LEU 4 -0.0205
LEU 4CYS 5 -0.0279
CYS 5ALA 6 0.0296
ALA 6ASN 7 0.0191
ASN 7LEU 8 -0.0031
LEU 8VAL 9 0.1098
VAL 9PRO 10 -0.1520
PRO 10VAL 11 0.0754
VAL 11PRO 12 0.0363
PRO 12ILE 13 -0.0258
ILE 13THR 14 0.0461
THR 14ASN 15 0.0511
ASN 15ALA 16 0.0075
ALA 16THR 17 0.0718
THR 17LEU 18 0.0187
LEU 18ASP 19 0.0214
ASP 19ARG 20 0.1316
ARG 20ILE 21 0.0614
ILE 21THR 22 0.0245
THR 22GLY 23 -0.2937
GLY 23LYS 24 -0.2692
LYS 24TRP 25 -0.1044
TRP 25PHE 26 -0.0875
PHE 26TYR 27 -0.0820
TYR 27ILE 28 -0.0174
ILE 28ALA 29 0.0200
ALA 29SER 30 0.0005
SER 30ALA 31 -0.0109
ALA 31PHE 32 -0.0094
PHE 32ARG 33 0.0042
ARG 33ASN 34 -0.0066
ASN 34GLU 35 -0.0074
GLU 35GLU 36 -0.0037
GLU 36TYR 37 -0.0297
TYR 37ASN 38 0.0669
ASN 38LYS 39 0.0202
LYS 39SER 40 -0.0726
SER 40VAL 41 -0.0671
VAL 41GLN 42 0.0412
GLN 42GLU 43 0.0034
GLU 43ILE 44 -0.1104
ILE 44GLN 45 0.0821
GLN 45ALA 46 -0.0266
ALA 46THR 47 -0.0147
THR 47PHE 48 -0.1094
PHE 48PHE 49 0.0099
PHE 49TYR 50 -0.0790
TYR 50PHE 51 -0.2431
PHE 51THR 52 -0.0289
THR 52PRO 53 -0.2605
PRO 53ASN 54 -0.0027
ASN 54LYS 55 0.0025
LYS 55THR 56 0.0033
THR 56GLU 57 0.0068
GLU 57ASP 58 0.0275
ASP 58THR 59 0.0073
THR 59ILE 60 0.0243
ILE 60PHE 61 -0.1556
PHE 61LEU 62 0.0509
LEU 62ARG 63 -0.0229
ARG 63GLU 64 -0.1217
GLU 64TYR 65 0.1202
TYR 65GLN 66 -0.1039
GLN 66THR 67 0.0143
THR 67ARG 68 -0.0222
ARG 68GLN 69 0.0033
GLN 69ASN 70 0.0264
ASN 70GLN 71 0.0261
GLN 71CYS 72 0.0968
CYS 72PHE 73 0.0031
PHE 73TYR 74 -0.0061
TYR 74ASN 75 0.1649
ASN 75SER 76 0.0236
SER 76SER 77 0.1182
SER 77TYR 78 0.2227
TYR 78LEU 79 -0.0881
LEU 79ASN 80 0.0765
ASN 80VAL 81 -0.0024
VAL 81GLN 82 -0.0356
GLN 82ARG 83 -0.0368
ARG 83GLU 84 0.0046
GLU 84ASN 85 0.0372
ASN 85GLY 86 -0.0238
GLY 86THR 87 -0.0318
THR 87VAL 88 -0.0083
VAL 88SER 89 -0.0151
SER 89ARG 90 0.0673
ARG 90TYR 91 0.0730
TYR 91GLU 92 -0.0906
GLU 92GLY 93 0.1209
GLY 93GLY 94 -0.0525
GLY 94ARG 95 -0.0438
ARG 95GLU 96 -0.1373
GLU 96HIS 97 0.0413
HIS 97VAL 98 -0.1093
VAL 98ALA 99 0.0470
ALA 99HIS 100 -0.0643
HIS 100LEU 101 -0.0122
LEU 101LEU 102 -0.0451
LEU 102PHE 103 -0.0717
PHE 103LEU 104 -0.0062
LEU 104ARG 105 -0.0095
ARG 105ASP 106 -0.0254
ASP 106THR 107 0.0414
THR 107LYS 108 -0.0825
LYS 108THR 109 -0.0147
THR 109LEU 110 0.0158
LEU 110MET 111 -0.0510
MET 111PHE 112 -0.0312
PHE 112GLY 113 -0.1326
GLY 113SER 114 0.0507
SER 114TYR 115 -0.0169
TYR 115LEU 116 0.0459
LEU 116ASP 117 -0.0033
ASP 117ASP 118 0.0145
ASP 118GLU 119 -0.0127
GLU 119LYS 120 0.0150
LYS 120ASN 121 -0.0338
ASN 121TRP 122 0.0092
TRP 122GLY 123 -0.0049
GLY 123LEU 124 -0.0220
LEU 124SER 125 -0.0172
SER 125PHE 126 -0.0221
PHE 126TYR 127 -0.0815
TYR 127ALA 128 0.0317
ALA 128ASP 129 0.0395
ASP 129LYS 130 -0.0118
LYS 130PRO 131 -0.1297
PRO 131GLU 132 0.0282
GLU 132THR 133 -0.0268
THR 133THR 134 0.0059
THR 134LYS 135 0.0130
LYS 135GLU 136 -0.0040
GLU 136GLN 137 0.0144
GLN 137LEU 138 0.0232
LEU 138GLY 139 0.0115
GLY 139GLU 140 -0.0094
GLU 140PHE 141 0.0085
PHE 141TYR 142 0.0020
TYR 142GLU 143 -0.0269
GLU 143ALA 144 -0.0195
ALA 144LEU 145 0.0138
LEU 145ASP 146 -0.0100
ASP 146CYS 147 0.0048
CYS 147LEU 148 -0.0037
LEU 148ARG 149 -0.0247
ARG 149ILE 150 0.0154
ILE 150PRO 151 -0.0215
PRO 151ARG 152 0.0154
ARG 152SER 153 0.0023
SER 153ASP 154 -0.0109
ASP 154VAL 155 0.0165
VAL 155MET 156 -0.0167
MET 156TYR 157 0.1352
TYR 157THR 158 0.0677
THR 158ASP 159 0.0954
ASP 159TRP 160 0.0703
TRP 160LYS 161 -0.0205
LYS 161LYS 162 -0.1125
LYS 162ASP 163 0.1045
ASP 163LYS 164 -0.0227
LYS 164CYS 165 0.0355
CYS 165GLU 166 -0.0277
GLU 166PRO 167 -0.0074
PRO 167LEU 168 -0.0927
LEU 168GLU 169 -0.0889
GLU 169LYS 170 -0.0436
LYS 170GLN 171 -0.1018
GLN 171HIS 172 -0.0723
HIS 172GLU 173 0.0740
GLU 173LYS 174 -0.1271
LYS 174GLU 175 -0.0400
GLU 175ARG 176 -0.1970
ARG 176LYS 177 -0.1063
LYS 177GLN 178 -0.0728

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.