CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225123556539

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 0.0496
GLN 1ILE 2 -0.0097
ILE 2PRO 3 0.0150
PRO 3LEU 4 -0.0551
LEU 4CYS 5 0.0446
CYS 5ALA 6 -0.0477
ALA 6ASN 7 0.1582
ASN 7LEU 8 -0.1103
LEU 8VAL 9 0.0633
VAL 9PRO 10 0.0975
PRO 10VAL 11 0.0554
VAL 11PRO 12 0.0876
PRO 12ILE 13 0.0235
ILE 13THR 14 -0.0234
THR 14ASN 15 0.0749
ASN 15ALA 16 -0.0192
ALA 16THR 17 0.0674
THR 17LEU 18 0.0046
LEU 18ASP 19 -0.0318
ASP 19ARG 20 0.0510
ARG 20ILE 21 0.0441
ILE 21THR 22 0.0491
THR 22GLY 23 -0.0168
GLY 23LYS 24 -0.0680
LYS 24TRP 25 0.0253
TRP 25PHE 26 -0.0448
PHE 26TYR 27 -0.0503
TYR 27ILE 28 -0.0218
ILE 28ALA 29 -0.0123
ALA 29SER 30 0.0183
SER 30ALA 31 -0.0640
ALA 31PHE 32 0.0151
PHE 32ARG 33 -0.0307
ARG 33ASN 34 0.0203
ASN 34GLU 35 -0.0446
GLU 35GLU 36 0.0079
GLU 36TYR 37 -0.0149
TYR 37ASN 38 0.0966
ASN 38LYS 39 0.0190
LYS 39SER 40 -0.0690
SER 40VAL 41 -0.0269
VAL 41GLN 42 0.1097
GLN 42GLU 43 -0.1340
GLU 43ILE 44 0.0128
ILE 44GLN 45 0.0644
GLN 45ALA 46 0.0055
ALA 46THR 47 0.0819
THR 47PHE 48 -0.0137
PHE 48PHE 49 0.0052
PHE 49TYR 50 0.0173
TYR 50PHE 51 0.0971
PHE 51THR 52 -0.0076
THR 52PRO 53 0.1658
PRO 53ASN 54 -0.0350
ASN 54LYS 55 0.0776
LYS 55THR 56 -0.0145
THR 56GLU 57 -0.0470
GLU 57ASP 58 0.0158
ASP 58THR 59 0.1867
THR 59ILE 60 0.0135
ILE 60PHE 61 0.1813
PHE 61LEU 62 0.0118
LEU 62ARG 63 0.2652
ARG 63GLU 64 0.0833
GLU 64TYR 65 0.1672
TYR 65GLN 66 -0.0562
GLN 66THR 67 0.0851
THR 67ARG 68 -0.0278
ARG 68GLN 69 0.0296
GLN 69ASN 70 -0.0247
ASN 70GLN 71 0.0450
GLN 71CYS 72 -0.0128
CYS 72PHE 73 0.0339
PHE 73TYR 74 0.0149
TYR 74ASN 75 0.1384
ASN 75SER 76 0.0411
SER 76SER 77 0.3863
SER 77TYR 78 0.2791
TYR 78LEU 79 -0.0181
LEU 79ASN 80 0.1617
ASN 80VAL 81 -0.0268
VAL 81GLN 82 0.1053
GLN 82ARG 83 -0.1621
ARG 83GLU 84 0.0390
GLU 84ASN 85 0.0181
ASN 85GLY 86 -0.0501
GLY 86THR 87 -0.0291
THR 87VAL 88 0.1088
VAL 88SER 89 -0.1119
SER 89ARG 90 0.0167
ARG 90TYR 91 0.0287
TYR 91GLU 92 -0.0684
GLU 92GLY 93 0.1344
GLY 93GLY 94 -0.0680
GLY 94ARG 95 -0.0595
ARG 95GLU 96 -0.1857
GLU 96HIS 97 0.0561
HIS 97VAL 98 -0.2294
VAL 98ALA 99 -0.0560
ALA 99HIS 100 -0.0344
HIS 100LEU 101 0.0355
LEU 101LEU 102 0.0099
LEU 102PHE 103 -0.1408
PHE 103LEU 104 -0.0439
LEU 104ARG 105 -0.0500
ARG 105ASP 106 -0.0057
ASP 106THR 107 -0.0331
THR 107LYS 108 -0.0453
LYS 108THR 109 -0.0271
THR 109LEU 110 -0.0177
LEU 110MET 111 0.0050
MET 111PHE 112 -0.0173
PHE 112GLY 113 0.0545
GLY 113SER 114 -0.0142
SER 114TYR 115 0.0335
TYR 115LEU 116 -0.0691
LEU 116ASP 117 -0.0125
ASP 117ASP 118 0.0413
ASP 118GLU 119 -0.0063
GLU 119LYS 120 -0.0067
LYS 120ASN 121 -0.0131
ASN 121TRP 122 0.0081
TRP 122GLY 123 -0.0076
GLY 123LEU 124 -0.0082
LEU 124SER 125 -0.0152
SER 125PHE 126 0.0275
PHE 126TYR 127 -0.0132
TYR 127ALA 128 0.0338
ALA 128ASP 129 0.0180
ASP 129LYS 130 -0.0240
LYS 130PRO 131 0.0215
PRO 131GLU 132 -0.0175
GLU 132THR 133 -0.1967
THR 133THR 134 -0.0053
THR 134LYS 135 -0.0172
LYS 135GLU 136 0.0048
GLU 136GLN 137 0.0108
GLN 137LEU 138 0.0476
LEU 138GLY 139 -0.0794
GLY 139GLU 140 0.0607
GLU 140PHE 141 0.0186
PHE 141TYR 142 0.0286
TYR 142GLU 143 -0.0961
GLU 143ALA 144 0.0149
ALA 144LEU 145 0.0282
LEU 145ASP 146 -0.0383
ASP 146CYS 147 -0.0106
CYS 147LEU 148 -0.0580
LEU 148ARG 149 0.0330
ARG 149ILE 150 -0.0992
ILE 150PRO 151 0.0223
PRO 151ARG 152 -0.0143
ARG 152SER 153 0.0818
SER 153ASP 154 0.0947
ASP 154VAL 155 -0.0328
VAL 155MET 156 -0.1399
MET 156TYR 157 -0.0087
TYR 157THR 158 -0.2401
THR 158ASP 159 -0.0756
ASP 159TRP 160 -0.0934
TRP 160LYS 161 -0.0071
LYS 161LYS 162 0.0643
LYS 162ASP 163 -0.0560
ASP 163LYS 164 -0.0544
LYS 164CYS 165 0.0057
CYS 165GLU 166 0.0134
GLU 166PRO 167 -0.0321
PRO 167LEU 168 0.2057
LEU 168GLU 169 -0.0056
GLU 169LYS 170 0.0641
LYS 170GLN 171 0.0375
GLN 171HIS 172 0.1030
HIS 172GLU 173 0.0418
GLU 173LYS 174 0.0113
LYS 174GLU 175 0.0351
GLU 175ARG 176 0.2217
ARG 176LYS 177 0.2481
LYS 177GLN 178 -0.0393

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.