Should you encounter any unexpected behaviour,
please let us know.

* TRANSPORT PROTEIN 21-OCT-10 3APV *

CA strain for 240110225555577823

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
PRO 3 LEU 4 0.0000

LEU 4 CYS 5 -0.0020

CYS 5 ALA 6 -0.0001

ALA 6 ASN 7 0.1039

ASN 7 LEU 8 0.0003

LEU 8 VAL 9 0.0425

VAL 9 PRO 10 0.0000

PRO 10 VAL 11 -0.0104

VAL 11 PRO 12 0.0003

PRO 12 ILE 13 0.0401

ILE 13 THR 14 0.0001

THR 14 ASN 15 0.0170

ASN 15 ALA 16 -0.0002

ALA 16 THR 17 0.0123

THR 17 LEU 18 0.0002

LEU 18 ASP 19 0.0059

ASP 19 ARG 20 -0.0001

ARG 20 ILE 21 0.0853

ILE 21 THR 22 0.0001

THR 22 GLY 23 -0.0811

GLY 23 LYS 24 -0.0003

LYS 24 TRP 25 0.0227

TRP 25 PHE 26 -0.0001

PHE 26 TYR 27 -0.0468

TYR 27 ILE 28 0.0003

ILE 28 ALA 29 -0.0046

ALA 29 SER 30 -0.0002

SER 30 ALA 31 -0.0033

ALA 31 PHE 32 0.0000

PHE 32 ARG 33 -0.0107

ARG 33 ASN 34 0.0000

ASN 34 GLU 35 -0.0073

GLU 35 GLU 36 0.0001

GLU 36 TYR 37 -0.0058

TYR 37 ASN 38 0.0000

ASN 38 LYS 39 0.0191

LYS 39 SER 40 -0.0004

SER 40 VAL 41 0.1020

VAL 41 GLN 42 0.0003

GLN 42 GLU 43 0.0354

GLU 43 ILE 44 -0.0001

ILE 44 GLN 45 -0.0178

GLN 45 ALA 46 -0.0000

ALA 46 THR 47 -0.0773

THR 47 PHE 48 -0.0002

PHE 48 PHE 49 -0.1607

PHE 49 TYR 50 -0.0001

TYR 50 PHE 51 -0.1178

PHE 51 THR 52 0.0003

THR 52 PRO 53 -0.0609

PRO 53 ASN 54 -0.0000

ASN 54 LYS 55 0.1334

LYS 55 THR 56 -0.0001

THR 56 GLU 57 0.0045

GLU 57 ASP 58 -0.0000

ASP 58 THR 59 0.0205

THR 59 ILE 60 -0.0004

ILE 60 PHE 61 0.0656

PHE 61 LEU 62 0.0002

LEU 62 ARG 63 -0.1179

ARG 63 GLU 64 -0.0003

GLU 64 TYR 65 -0.1364

TYR 65 GLN 66 -0.0001

GLN 66 THR 67 -0.0700

THR 67 ARG 68 0.0000

ARG 68 GLN 69 -0.0166

GLN 69 ASN 70 0.0002

ASN 70 GLN 71 0.0279

GLN 71 CYS 72 -0.0005

CYS 72 PHE 73 -0.0184

PHE 73 TYR 74 0.0003

TYR 74 ASN 75 -0.1218

ASN 75 SER 76 -0.0001

SER 76 SER 77 0.0715

SER 77 TYR 78 0.0000

TYR 78 LEU 79 0.3058

LEU 79 ASN 80 -0.0001

ASN 80 VAL 81 0.1716

VAL 81 GLN 82 -0.0003

GLN 82 ARG 83 -0.0079

ARG 83 GLU 84 0.0002

GLU 84 ASN 85 -0.0128

ASN 85 GLY 86 0.0001

GLY 86 THR 87 0.0783

THR 87 VAL 88 0.0002

VAL 88 SER 89 0.0814

SER 89 ARG 90 0.0002

ARG 90 TYR 91 0.1477

TYR 91 GLU 92 -0.0001

GLU 92 GLY 93 0.0028

GLY 93 GLY 94 -0.0005

GLY 94 ARG 95 0.1661

ARG 95 GLU 96 -0.0002

GLU 96 HIS 97 0.1044

HIS 97 VAL 98 -0.0001

VAL 98 ALA 99 0.0994

ALA 99 HIS 100 -0.0000

HIS 100 LEU 101 -0.0190

LEU 101 LEU 102 -0.0002

LEU 102 PHE 103 -0.0373

PHE 103 LEU 104 -0.0001

LEU 104 ARG 105 -0.0218

ARG 105 ASP 106 0.0003

ASP 106 THR 107 0.0261

THR 107 LYS 108 0.0001

LYS 108 THR 109 -0.0532

THR 109 LEU 110 -0.0001

LEU 110 MET 111 -0.0176

MET 111 PHE 112 -0.0001

PHE 112 GLY 113 0.0002

GLY 113 SER 114 -0.0000

SER 114 TYR 115 -0.0260

TYR 115 LEU 116 0.0001

LEU 116 ASP 117 -0.0081

ASP 117 ASP 118 0.0003

ASP 118 GLU 119 -0.0015

GLU 119 LYS 120 -0.0002

LYS 120 ASN 121 0.0164

ASN 121 TRP 122 0.0000

TRP 122 GLY 123 -0.0146

GLY 123 LEU 124 0.0005

LEU 124 SER 125 0.0197

SER 125 PHE 126 0.0002

PHE 126 TYR 127 0.0563

TYR 127 ALA 128 -0.0002

ALA 128 ASP 129 -0.0418

ASP 129 LYS 130 -0.0004

LYS 130 PRO 131 -0.0167

PRO 131 GLU 132 -0.0001

GLU 132 THR 133 0.1203

THR 133 THR 134 -0.0003

THR 134 LYS 135 0.0352

LYS 135 GLU 136 -0.0001

GLU 136 GLN 137 0.0232

GLN 137 LEU 138 0.0002

LEU 138 GLY 139 0.0479

GLY 139 GLU 140 0.0002

GLU 140 PHE 141 -0.0105

PHE 141 TYR 142 -0.0000

TYR 142 GLU 143 0.0682

GLU 143 ALA 144 -0.0004

ALA 144 LEU 145 0.0188

LEU 145 ASP 146 0.0001

ASP 146 CYS 147 -0.0116

CYS 147 LEU 148 -0.0000

LEU 148 ARG 149 0.0235

ARG 149 ILE 150 0.0004

ILE 150 PRO 151 0.0133

PRO 151 ARG 152 -0.0001

ARG 152 SER 153 0.0007

SER 153 ASP 154 -0.0001

ASP 154 VAL 155 -0.0148

VAL 155 MET 156 0.0003

MET 156 TYR 157 -0.0513

TYR 157 THR 158 0.0002

THR 158 ASP 159 -0.0699

ASP 159 TRP 160 -0.0000

TRP 160 LYS 161 -0.0394

LYS 161 LYS 162 0.0001

LYS 162 ASP 163 -0.0059

ASP 163 LYS 164 0.0001

LYS 164 CYS 165 -0.0222

CYS 165 GLU 166 -0.0000

GLU 166 PRO 167 0.0278

PRO 167 LEU 168 -0.0000

LEU 168 GLU 169 0.0706

GLU 169 LYS 170 -0.0001

LYS 170 GLN 171 0.2540

GLN 171 HIS 172 -0.0002

HIS 172 PRO 3 0.2150

PRO 3 LEU 4 -0.0002

LEU 4 CYS 5 -0.0794

CYS 5 ALA 6 -0.0002

ALA 6 ASN 7 0.1978

ASN 7 LEU 8 0.0002

LEU 8 VAL 9 0.0224

VAL 9 PRO 10 -0.0001

PRO 10 VAL 11 -0.0207

VAL 11 PRO 12 -0.0002

PRO 12 ILE 13 0.0430

ILE 13 THR 14 -0.0003

THR 14 ASN 15 0.0213

ASN 15 ALA 16 -0.0001

ALA 16 THR 17 0.0111

THR 17 LEU 18 0.0002

LEU 18 ASP 19 0.0032

ASP 19 ARG 20 -0.0002

ARG 20 ILE 21 0.0948

ILE 21 THR 22 -0.0003

THR 22 GLY 23 -0.1173

GLY 23 LYS 24 0.0002

LYS 24 TRP 25 0.0142

TRP 25 PHE 26 0.0004

PHE 26 TYR 27 -0.0375

TYR 27 ILE 28 -0.0000

ILE 28 ALA 29 0.0114

ALA 29 SER 30 -0.0004

SER 30 ALA 31 0.0077

ALA 31 PHE 32 0.0004

PHE 32 ARG 33 0.0049

ARG 33 ASN 34 0.0001

ASN 34 GLU 35 -0.0239

GLU 35 GLU 36 0.0000

GLU 36 TYR 37 -0.0073

TYR 37 ASN 38 -0.0001

ASN 38 LYS 39 -0.0001

LYS 39 SER 40 0.0002

SER 40 VAL 41 0.0837

VAL 41 GLN 42 0.0005

GLN 42 GLU 43 0.0032

GLU 43 ILE 44 0.0003

ILE 44 GLN 45 -0.0148

GLN 45 ALA 46 -0.0002

ALA 46 THR 47 -0.0711

THR 47 PHE 48 0.0002

PHE 48 PHE 49 -0.1454

PHE 49 TYR 50 -0.0002

TYR 50 PHE 51 -0.1205

PHE 51 THR 52 0.0000

THR 52 PRO 53 -0.0317

PRO 53 ASN 54 0.0005

ASN 54 LYS 55 0.1099

LYS 55 THR 56 0.0001

THR 56 GLU 57 0.0152

GLU 57 ASP 58 -0.0003

ASP 58 THR 59 0.0266

THR 59 ILE 60 -0.0005

ILE 60 PHE 61 0.0598

PHE 61 LEU 62 0.0003

LEU 62 ARG 63 -0.0987

ARG 63 GLU 64 -0.0001

GLU 64 TYR 65 -0.1237

TYR 65 GLN 66 -0.0004

GLN 66 THR 67 -0.0799

THR 67 ARG 68 0.0001

ARG 68 GLN 69 -0.0182

GLN 69 ASN 70 -0.0004

ASN 70 GLN 71 -0.0103

GLN 71 CYS 72 -0.0003

CYS 72 PHE 73 -0.0023

PHE 73 TYR 74 -0.0001

TYR 74 ASN 75 -0.1009

ASN 75 SER 76 0.0001

SER 76 SER 77 0.0627

SER 77 TYR 78 0.0001

TYR 78 LEU 79 0.2879

LEU 79 ASN 80 0.0002

ASN 80 VAL 81 0.1967

VAL 81 GLN 82 -0.0002

GLN 82 ARG 83 0.0034

ARG 83 GLU 84 -0.0001

GLU 84 ASN 85 -0.0152

ASN 85 GLY 86 -0.0001

GLY 86 THR 87 0.0742

THR 87 VAL 88 -0.0001

VAL 88 SER 89 0.1159

SER 89 ARG 90 -0.0003

ARG 90 TYR 91 0.1991

TYR 91 GLU 92 -0.0002

GLU 92 GLY 93 -0.0211

GLY 93 GLY 94 -0.0004

GLY 94 ARG 95 0.1667

ARG 95 GLU 96 0.0003

GLU 96 HIS 97 0.0922

HIS 97 VAL 98 0.0003

VAL 98 ALA 99 0.0947

ALA 99 HIS 100 -0.0002

HIS 100 LEU 101 -0.0336

LEU 101 LEU 102 -0.0002

LEU 102 PHE 103 -0.0255

PHE 103 LEU 104 -0.0000

LEU 104 ARG 105 -0.0010

ARG 105 ASP 106 -0.0001

ASP 106 THR 107 0.0373

THR 107 LYS 108 -0.0000

LYS 108 THR 109 -0.0497

THR 109 LEU 110 0.0003

LEU 110 MET 111 -0.0196

MET 111 PHE 112 -0.0002

PHE 112 GLY 113 -0.0122

GLY 113 SER 114 0.0002

SER 114 TYR 115 -0.0327

TYR 115 LEU 116 -0.0002

LEU 116 ASP 117 -0.0284

ASP 117 ASP 118 0.0000

ASP 118 GLU 119 0.0230

GLU 119 LYS 120 -0.0000

LYS 120 ASN 121 0.0101

ASN 121 TRP 122 0.0002

TRP 122 GLY 123 -0.0089

GLY 123 LEU 124 -0.0002

LEU 124 SER 125 0.0158

SER 125 PHE 126 0.0002

PHE 126 TYR 127 0.0582

TYR 127 ALA 128 0.0002

ALA 128 ASP 129 -0.0347

ASP 129 LYS 130 -0.0004

LYS 130 PRO 131 -0.0278

PRO 131 GLU 132 0.0000

GLU 132 THR 133 0.1035

THR 133 THR 134 0.0003

THR 134 LYS 135 0.0581

LYS 135 GLU 136 -0.0002

GLU 136 GLN 137 0.0107

GLN 137 LEU 138 -0.0000

LEU 138 GLY 139 0.0500

GLY 139 GLU 140 0.0004

GLU 140 PHE 141 -0.0174

PHE 141 TYR 142 0.0004

TYR 142 GLU 143 0.0448

GLU 143 ALA 144 0.0000

ALA 144 LEU 145 -0.0003

LEU 145 ASP 146 -0.0001

ASP 146 CYS 147 -0.0236

CYS 147 LEU 148 -0.0001

LEU 148 ARG 149 0.0264

ARG 149 ILE 150 -0.0003

ILE 150 PRO 151 0.0182

PRO 151 ARG 152 -0.0005

ARG 152 SER 153 -0.0041

SER 153 ASP 154 -0.0001

ASP 154 VAL 155 -0.0083

VAL 155 MET 156 -0.0001

MET 156 TYR 157 -0.0292

TYR 157 THR 158 -0.0001

THR 158 ASP 159 -0.0535

ASP 159 TRP 160 0.0000

TRP 160 LYS 161 -0.0256

LYS 161 LYS 162 0.0005

LYS 162 ASP 163 -0.0094

ASP 163 LYS 164 0.0002

LYS 164 CYS 165 -0.0141

CYS 165 GLU 166 0.0001

GLU 166 PRO 167 0.0187

PRO 167 LEU 168 -0.0002

LEU 168 GLU 169 0.0744

GLU 169 LYS 170 -0.0003

LYS 170 GLN 171 0.1403

GLN 171 HIS 172 0.0002

HIS 172 GLU 173 0.0374

GLU 173 LYS 174 -0.0003

LYS 174 GLU 175 -0.0010

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** TRANSPORT PROTEIN 21-OCT-10 3APV ***

CA strain for 240110225555577823

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* TRANSPORT PROTEIN 21-OCT-10 3APV *