Should you encounter any unexpected behaviour,
please let us know.

* TRANSPORT PROTEIN 21-OCT-10 3APU *

CA strain for 240110225702578652

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
GLN 1 ILE 2 -0.0000

ILE 2 PRO 3 -0.1271

PRO 3 LEU 4 0.0001

LEU 4 CYS 5 0.1008

CYS 5 ALA 6 0.0002

ALA 6 ASN 7 0.1648

ASN 7 LEU 8 -0.0002

LEU 8 VAL 9 -0.0879

VAL 9 PRO 10 -0.0003

PRO 10 VAL 11 -0.0638

VAL 11 PRO 12 -0.0003

PRO 12 ILE 13 0.0327

ILE 13 THR 14 0.0001

THR 14 ASN 15 -0.0211

ASN 15 ALA 16 -0.0002

ALA 16 THR 17 0.0009

THR 17 LEU 18 -0.0003

LEU 18 ASP 19 -0.0337

ASP 19 ARG 20 0.0000

ARG 20 ILE 21 0.0223

ILE 21 THR 22 -0.0001

THR 22 GLY 23 0.0368

GLY 23 LYS 24 0.0001

LYS 24 TRP 25 0.0068

TRP 25 PHE 26 0.0001

PHE 26 TYR 27 -0.0092

TYR 27 ILE 28 -0.0002

ILE 28 ALA 29 0.0334

ALA 29 SER 30 -0.0001

SER 30 ALA 31 0.0369

ALA 31 PHE 32 0.0003

PHE 32 ARG 33 0.0284

ARG 33 ASN 34 0.0002

ASN 34 GLU 35 0.0069

GLU 35 GLU 36 -0.0002

GLU 36 TYR 37 -0.0411

TYR 37 ASN 38 -0.0002

ASN 38 LYS 39 0.0059

LYS 39 SER 40 -0.0001

SER 40 VAL 41 -0.0097

VAL 41 GLN 42 -0.0001

GLN 42 GLU 43 -0.0349

GLU 43 ILE 44 0.0001

ILE 44 GLN 45 0.0649

GLN 45 ALA 46 0.0005

ALA 46 THR 47 -0.0526

THR 47 PHE 48 0.0000

PHE 48 PHE 49 -0.0711

PHE 49 TYR 50 -0.0002

TYR 50 PHE 51 0.0086

PHE 51 THR 52 -0.0002

THR 52 PRO 53 0.0385

PRO 53 ASN 54 -0.0003

ASN 54 LYS 55 0.0511

LYS 55 THR 56 -0.0000

THR 56 GLU 57 -0.0079

GLU 57 ASP 58 0.0000

ASP 58 THR 59 0.0880

THR 59 ILE 60 -0.0001

ILE 60 PHE 61 0.1425

PHE 61 LEU 62 -0.0004

LEU 62 ARG 63 0.0177

ARG 63 GLU 64 0.0005

GLU 64 TYR 65 -0.0705

TYR 65 GLN 66 0.0004

GLN 66 THR 67 -0.0363

THR 67 ARG 68 0.0003

ARG 68 GLN 69 -0.0279

GLN 69 ASN 70 0.0000

ASN 70 GLN 71 0.0081

GLN 71 CYS 72 -0.0002

CYS 72 PHE 73 -0.0447

PHE 73 TYR 74 -0.0002

TYR 74 ASN 75 -0.0584

ASN 75 SER 76 -0.0002

SER 76 SER 77 0.1031

SER 77 TYR 78 -0.0001

TYR 78 LEU 79 0.2340

LEU 79 ASN 80 -0.0001

ASN 80 VAL 81 0.1067

VAL 81 GLN 82 0.0001

GLN 82 ARG 83 -0.0155

ARG 83 GLU 84 0.0002

GLU 84 ASN 85 -0.0245

ASN 85 GLY 86 0.0000

GLY 86 THR 87 0.0965

THR 87 VAL 88 0.0003

VAL 88 SER 89 0.0740

SER 89 ARG 90 -0.0004

ARG 90 TYR 91 0.0529

TYR 91 GLU 92 0.0000

GLU 92 GLY 93 -0.0783

GLY 93 GLY 94 -0.0004

GLY 94 ARG 95 0.0833

ARG 95 GLU 96 0.0001

GLU 96 HIS 97 0.0308

HIS 97 VAL 98 0.0003

VAL 98 ALA 99 0.1137

ALA 99 HIS 100 -0.0003

HIS 100 LEU 101 -0.0642

LEU 101 LEU 102 -0.0003

LEU 102 PHE 103 -0.0328

PHE 103 LEU 104 0.0002

LEU 104 ARG 105 0.0709

ARG 105 ASP 106 -0.0001

ASP 106 THR 107 0.0578

THR 107 LYS 108 -0.0000

LYS 108 THR 109 -0.0111

THR 109 LEU 110 -0.0001

LEU 110 MET 111 -0.0182

MET 111 PHE 112 0.0001

PHE 112 GLY 113 0.0220

GLY 113 SER 114 -0.0001

SER 114 TYR 115 -0.0259

TYR 115 LEU 116 -0.0003

LEU 116 ASP 117 0.0061

ASP 117 ASP 118 0.0001

ASP 118 GLU 119 -0.0112

GLU 119 LYS 120 -0.0001

LYS 120 ASN 121 0.0082

ASN 121 TRP 122 0.0001

TRP 122 GLY 123 0.0119

GLY 123 LEU 124 0.0003

LEU 124 SER 125 0.0394

SER 125 PHE 126 0.0002

PHE 126 TYR 127 0.0228

TYR 127 ALA 128 0.0003

ALA 128 ASP 129 0.0089

ASP 129 LYS 130 -0.0003

LYS 130 PRO 131 -0.0129

PRO 131 GLU 132 0.0004

GLU 132 THR 133 -0.1176

THR 133 THR 134 -0.0001

THR 134 LYS 135 -0.0068

LYS 135 GLU 136 -0.0003

GLU 136 GLN 137 0.0119

GLN 137 LEU 138 -0.0003

LEU 138 GLY 139 -0.0613

GLY 139 GLU 140 0.0001

GLU 140 PHE 141 -0.0243

PHE 141 TYR 142 0.0003

TYR 142 GLU 143 -0.2170

GLU 143 ALA 144 0.0001

ALA 144 LEU 145 0.0425

LEU 145 ASP 146 -0.0003

ASP 146 CYS 147 0.0631

CYS 147 LEU 148 -0.0002

LEU 148 ARG 149 0.0413

ARG 149 ILE 150 0.0001

ILE 150 PRO 151 0.0401

PRO 151 ARG 152 0.0002

ARG 152 SER 153 -0.0295

SER 153 ASP 154 0.0001

ASP 154 VAL 155 0.0252

VAL 155 MET 156 -0.0003

MET 156 TYR 157 0.0140

TYR 157 THR 158 0.0001

THR 158 ASP 159 -0.0160

ASP 159 TRP 160 -0.0003

TRP 160 LYS 161 -0.0443

LYS 161 LYS 162 -0.0002

LYS 162 ASP 163 0.0030

ASP 163 LYS 164 0.0001

LYS 164 CYS 165 0.0091

CYS 165 GLU 166 -0.0001

GLU 166 PRO 167 -0.0423

PRO 167 LEU 168 -0.0003

LEU 168 GLU 169 0.0563

GLU 169 LYS 170 -0.0001

LYS 170 GLN 171 0.0556

GLN 171 HIS 172 0.0001

HIS 172 GLU 173 -0.0112

GLU 173 LYS 174 0.0005

LYS 174 GLU 175 0.0024

GLU 175 ILE 2 0.0789

ILE 2 PRO 3 0.0002

PRO 3 LEU 4 -0.0524

LEU 4 CYS 5 -0.0003

CYS 5 ALA 6 -0.0241

ALA 6 ASN 7 -0.0001

ASN 7 LEU 8 -0.0107

LEU 8 VAL 9 -0.0002

VAL 9 PRO 10 0.1299

PRO 10 VAL 11 0.0002

VAL 11 PRO 12 0.0449

PRO 12 ILE 13 -0.0001

ILE 13 THR 14 -0.0051

THR 14 ASN 15 0.0002

ASN 15 ALA 16 0.0093

ALA 16 THR 17 -0.0003

THR 17 LEU 18 0.0739

LEU 18 ASP 19 0.0002

ASP 19 ARG 20 0.0237

ARG 20 ILE 21 -0.0002

ILE 21 THR 22 0.0332

THR 22 GLY 23 0.0000

GLY 23 LYS 24 -0.0710

LYS 24 TRP 25 -0.0001

TRP 25 PHE 26 -0.0547

PHE 26 TYR 27 -0.0002

TYR 27 ILE 28 0.0145

ILE 28 ALA 29 -0.0004

ALA 29 SER 30 0.0278

SER 30 ALA 31 -0.0003

ALA 31 PHE 32 0.0126

PHE 32 ARG 33 -0.0002

ARG 33 ASN 34 -0.0007

ASN 34 GLU 35 -0.0004

GLU 35 GLU 36 -0.0296

GLU 36 TYR 37 0.0001

TYR 37 ASN 38 -0.0265

ASN 38 LYS 39 0.0002

LYS 39 SER 40 -0.0429

SER 40 VAL 41 0.0000

VAL 41 GLN 42 0.0127

GLN 42 GLU 43 0.0000

GLU 43 ILE 44 0.0062

ILE 44 GLN 45 0.0000

GLN 45 ALA 46 -0.0036

ALA 46 THR 47 -0.0002

THR 47 PHE 48 -0.0116

PHE 48 PHE 49 -0.0001

PHE 49 TYR 50 -0.0367

TYR 50 PHE 51 0.0002

PHE 51 THR 52 -0.0556

THR 52 PRO 53 0.0003

PRO 53 ASN 54 -0.0307

ASN 54 LYS 55 -0.0001

LYS 55 THR 56 -0.0253

THR 56 GLU 57 0.0003

GLU 57 ASP 58 0.0240

ASP 58 THR 59 0.0000

THR 59 ILE 60 -0.0237

ILE 60 PHE 61 -0.0000

PHE 61 LEU 62 -0.0405

LEU 62 ARG 63 -0.0000

ARG 63 GLU 64 -0.0490

GLU 64 TYR 65 -0.0001

TYR 65 GLN 66 -0.0166

GLN 66 THR 67 -0.0002

THR 67 ARG 68 0.0030

ARG 68 GLN 69 0.0001

GLN 69 ASN 70 0.0267

ASN 70 GLN 71 0.0000

GLN 71 CYS 72 -0.0361

CYS 72 PHE 73 0.0002

PHE 73 TYR 74 -0.0694

TYR 74 ASN 75 0.0000

ASN 75 SER 76 0.0060

SER 76 SER 77 -0.0002

SER 77 TYR 78 0.1583

TYR 78 LEU 79 0.0004

LEU 79 ASN 80 0.0476

ASN 80 VAL 81 -0.0002

VAL 81 GLN 82 0.0454

GLN 82 ARG 83 0.0002

ARG 83 GLU 84 0.0398

GLU 84 ASN 85 0.0001

ASN 85 GLY 86 -0.0147

GLY 86 THR 87 0.0001

THR 87 VAL 88 0.1017

VAL 88 SER 89 -0.0002

SER 89 ARG 90 0.1363

ARG 90 TYR 91 0.0002

TYR 91 GLU 92 0.1079

GLU 92 GLY 93 -0.0001

GLY 93 GLY 94 -0.1330

GLY 94 ARG 95 -0.0003

ARG 95 GLU 96 0.0980

GLU 96 HIS 97 -0.0000

HIS 97 VAL 98 0.0794

VAL 98 ALA 99 -0.0003

ALA 99 HIS 100 0.0750

HIS 100 LEU 101 -0.0003

LEU 101 LEU 102 0.0900

LEU 102 PHE 103 -0.0001

PHE 103 LEU 104 0.0844

LEU 104 ARG 105 0.0000

ARG 105 ASP 106 -0.0402

ASP 106 THR 107 0.0001

THR 107 LYS 108 -0.0227

LYS 108 THR 109 0.0003

THR 109 LEU 110 -0.0100

LEU 110 MET 111 -0.0004

MET 111 PHE 112 0.0074

PHE 112 GLY 113 0.0000

GLY 113 SER 114 -0.0394

SER 114 TYR 115 -0.0003

TYR 115 LEU 116 0.0284

LEU 116 ASP 117 0.0004

ASP 117 ASP 118 -0.0054

ASP 118 GLU 119 -0.0001

GLU 119 LYS 120 -0.0030

LYS 120 ASN 121 0.0001

ASN 121 TRP 122 -0.0028

TRP 122 GLY 123 -0.0003

GLY 123 LEU 124 -0.0000

LEU 124 SER 125 0.0002

SER 125 PHE 126 -0.0054

PHE 126 TYR 127 -0.0001

TYR 127 ALA 128 -0.0049

ALA 128 ASP 129 0.0001

ASP 129 LYS 130 -0.0174

LYS 130 PRO 131 -0.0006

PRO 131 GLU 132 -0.0153

GLU 132 THR 133 -0.0001

THR 133 THR 134 -0.0189

THR 134 LYS 135 -0.0000

LYS 135 GLU 136 0.0208

GLU 136 GLN 137 -0.0003

GLN 137 LEU 138 0.0219

LEU 138 GLY 139 0.0004

GLY 139 GLU 140 0.0238

GLU 140 PHE 141 -0.0001

PHE 141 TYR 142 0.0248

TYR 142 GLU 143 0.0003

GLU 143 ALA 144 0.0219

ALA 144 LEU 145 -0.0000

LEU 145 ASP 146 -0.0018

ASP 146 CYS 147 0.0000

CYS 147 LEU 148 -0.0093

LEU 148 ARG 149 -0.0003

ARG 149 ILE 150 -0.0120

ILE 150 PRO 151 -0.0003

PRO 151 ARG 152 0.0028

ARG 152 SER 153 0.0000

SER 153 ASP 154 -0.0045

ASP 154 VAL 155 -0.0004

VAL 155 MET 156 -0.0517

MET 156 TYR 157 0.0004

TYR 157 THR 158 -0.0443

THR 158 ASP 159 -0.0002

ASP 159 TRP 160 0.0123

TRP 160 LYS 161 -0.0004

LYS 161 LYS 162 -0.0451

LYS 162 ASP 163 -0.0002

ASP 163 LYS 164 -0.0223

LYS 164 CYS 165 0.0001

CYS 165 GLU 166 0.0265

GLU 166 PRO 167 -0.0005

PRO 167 LEU 168 -0.0454

LEU 168 GLU 169 -0.0001

GLU 169 LYS 170 -0.0032

LYS 170 GLN 171 0.0003

GLN 171 HIS 172 -0.0032

HIS 172 GLU 173 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** TRANSPORT PROTEIN 21-OCT-10 3APU ***

CA strain for 240110225702578652

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* TRANSPORT PROTEIN 21-OCT-10 3APU *