Should you encounter any unexpected behaviour,
please let us know.

* TRANSPORT PROTEIN 21-OCT-10 3APU *

CA strain for 240110225702578652

--- normal mode 7 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
GLN 1 ILE 2 0.0003

ILE 2 PRO 3 -0.0250

PRO 3 LEU 4 0.0001

LEU 4 CYS 5 0.0014

CYS 5 ALA 6 0.0002

ALA 6 ASN 7 0.0065

ASN 7 LEU 8 -0.0002

LEU 8 VAL 9 0.0192

VAL 9 PRO 10 0.0002

PRO 10 VAL 11 0.0286

VAL 11 PRO 12 0.0001

PRO 12 ILE 13 0.0130

ILE 13 THR 14 -0.0001

THR 14 ASN 15 0.0127

ASN 15 ALA 16 -0.0005

ALA 16 THR 17 0.0113

THR 17 LEU 18 -0.0001

LEU 18 ASP 19 -0.0025

ASP 19 ARG 20 0.0001

ARG 20 ILE 21 0.0064

ILE 21 THR 22 0.0001

THR 22 GLY 23 -0.0206

GLY 23 LYS 24 -0.0001

LYS 24 TRP 25 0.0217

TRP 25 PHE 26 -0.0000

PHE 26 TYR 27 0.0228

TYR 27 ILE 28 -0.0002

ILE 28 ALA 29 0.0284

ALA 29 SER 30 -0.0000

SER 30 ALA 31 0.0208

ALA 31 PHE 32 -0.0001

PHE 32 ARG 33 0.0183

ARG 33 ASN 34 -0.0001

ASN 34 GLU 35 -0.0107

GLU 35 GLU 36 -0.0002

GLU 36 TYR 37 0.0077

TYR 37 ASN 38 -0.0000

ASN 38 LYS 39 -0.0357

LYS 39 SER 40 0.0003

SER 40 VAL 41 -0.1068

VAL 41 GLN 42 0.0001

GLN 42 GLU 43 -0.0574

GLU 43 ILE 44 -0.0004

ILE 44 GLN 45 -0.0027

GLN 45 ALA 46 0.0002

ALA 46 THR 47 0.0156

THR 47 PHE 48 -0.0002

PHE 48 PHE 49 -0.0084

PHE 49 TYR 50 -0.0002

TYR 50 PHE 51 -0.0234

PHE 51 THR 52 -0.0002

THR 52 PRO 53 -0.0020

PRO 53 ASN 54 0.0003

ASN 54 LYS 55 0.0520

LYS 55 THR 56 0.0003

THR 56 GLU 57 -0.0001

GLU 57 ASP 58 -0.0000

ASP 58 THR 59 0.0159

THR 59 ILE 60 0.0000

ILE 60 PHE 61 0.0426

PHE 61 LEU 62 -0.0003

LEU 62 ARG 63 -0.0142

ARG 63 GLU 64 0.0002

GLU 64 TYR 65 -0.0036

TYR 65 GLN 66 0.0001

GLN 66 THR 67 0.0426

THR 67 ARG 68 0.0001

ARG 68 GLN 69 0.0374

GLN 69 ASN 70 -0.0003

ASN 70 GLN 71 -0.0134

GLN 71 CYS 72 -0.0000

CYS 72 PHE 73 0.0177

PHE 73 TYR 74 -0.0004

TYR 74 ASN 75 0.0204

ASN 75 SER 76 0.0003

SER 76 SER 77 0.0191

SER 77 TYR 78 -0.0002

TYR 78 LEU 79 0.0484

LEU 79 ASN 80 0.0002

ASN 80 VAL 81 -0.0476

VAL 81 GLN 82 0.0001

GLN 82 ARG 83 -0.0511

ARG 83 GLU 84 0.0001

GLU 84 ASN 85 0.0279

ASN 85 GLY 86 0.0003

GLY 86 THR 87 -0.0439

THR 87 VAL 88 -0.0000

VAL 88 SER 89 -0.0998

SER 89 ARG 90 -0.0001

ARG 90 TYR 91 -0.1049

TYR 91 GLU 92 -0.0000

GLU 92 GLY 93 -0.0469

GLY 93 GLY 94 -0.0001

GLY 94 ARG 95 -0.2605

ARG 95 GLU 96 -0.0001

GLU 96 HIS 97 -0.0704

HIS 97 VAL 98 0.0004

VAL 98 ALA 99 -0.0947

ALA 99 HIS 100 -0.0002

HIS 100 LEU 101 -0.0096

LEU 101 LEU 102 0.0002

LEU 102 PHE 103 -0.0385

PHE 103 LEU 104 -0.0001

LEU 104 ARG 105 -0.0144

ARG 105 ASP 106 -0.0002

ASP 106 THR 107 0.0071

THR 107 LYS 108 -0.0001

LYS 108 THR 109 -0.0121

THR 109 LEU 110 0.0000

LEU 110 MET 111 0.0018

MET 111 PHE 112 0.0003

PHE 112 GLY 113 0.0130

GLY 113 SER 114 0.0001

SER 114 TYR 115 -0.0012

TYR 115 LEU 116 0.0004

LEU 116 ASP 117 -0.0011

ASP 117 ASP 118 -0.0000

ASP 118 GLU 119 0.0041

GLU 119 LYS 120 -0.0002

LYS 120 ASN 121 -0.0096

ASN 121 TRP 122 -0.0000

TRP 122 GLY 123 0.0133

GLY 123 LEU 124 -0.0001

LEU 124 SER 125 0.0119

SER 125 PHE 126 0.0003

PHE 126 TYR 127 0.0237

TYR 127 ALA 128 0.0001

ALA 128 ASP 129 0.0012

ASP 129 LYS 130 0.0003

LYS 130 PRO 131 -0.0204

PRO 131 GLU 132 -0.0004

GLU 132 THR 133 0.0302

THR 133 THR 134 0.0005

THR 134 LYS 135 0.0105

LYS 135 GLU 136 0.0001

GLU 136 GLN 137 0.0011

GLN 137 LEU 138 0.0002

LEU 138 GLY 139 0.0113

GLY 139 GLU 140 0.0001

GLU 140 PHE 141 -0.0176

PHE 141 TYR 142 -0.0001

TYR 142 GLU 143 -0.0178

GLU 143 ALA 144 -0.0002

ALA 144 LEU 145 -0.0028

LEU 145 ASP 146 0.0002

ASP 146 CYS 147 -0.0027

CYS 147 LEU 148 -0.0001

LEU 148 ARG 149 0.0086

ARG 149 ILE 150 0.0000

ILE 150 PRO 151 0.0038

PRO 151 ARG 152 -0.0000

ARG 152 SER 153 -0.0023

SER 153 ASP 154 0.0001

ASP 154 VAL 155 0.0166

VAL 155 MET 156 -0.0001

MET 156 TYR 157 0.0500

TYR 157 THR 158 -0.0003

THR 158 ASP 159 0.0372

ASP 159 TRP 160 -0.0001

TRP 160 LYS 161 -0.0069

LYS 161 LYS 162 -0.0000

LYS 162 ASP 163 0.0060

ASP 163 LYS 164 0.0001

LYS 164 CYS 165 -0.0050

CYS 165 GLU 166 -0.0001

GLU 166 PRO 167 0.0266

PRO 167 LEU 168 0.0003

LEU 168 GLU 169 0.0279

GLU 169 LYS 170 -0.0001

LYS 170 GLN 171 0.0618

GLN 171 HIS 172 -0.0002

HIS 172 GLU 173 0.0078

GLU 173 LYS 174 -0.0004

LYS 174 GLU 175 0.0144

GLU 175 ILE 2 0.0689

ILE 2 PRO 3 -0.0002

PRO 3 LEU 4 -0.0021

LEU 4 CYS 5 0.0001

CYS 5 ALA 6 0.0028

ALA 6 ASN 7 0.0003

ASN 7 LEU 8 -0.0157

LEU 8 VAL 9 -0.0002

VAL 9 PRO 10 0.0027

PRO 10 VAL 11 -0.0003

VAL 11 PRO 12 0.0183

PRO 12 ILE 13 0.0001

ILE 13 THR 14 -0.0025

THR 14 ASN 15 -0.0003

ASN 15 ALA 16 -0.0034

ALA 16 THR 17 0.0003

THR 17 LEU 18 0.0199

LEU 18 ASP 19 0.0003

ASP 19 ARG 20 0.0020

ARG 20 ILE 21 0.0004

ILE 21 THR 22 0.0341

THR 22 GLY 23 0.0001

GLY 23 LYS 24 -0.0535

LYS 24 TRP 25 -0.0003

TRP 25 PHE 26 -0.0283

PHE 26 TYR 27 -0.0000

TYR 27 ILE 28 0.0058

ILE 28 ALA 29 -0.0000

ALA 29 SER 30 0.0168

SER 30 ALA 31 -0.0000

ALA 31 PHE 32 0.0159

PHE 32 ARG 33 0.0005

ARG 33 ASN 34 -0.0204

ASN 34 GLU 35 0.0000

GLU 35 GLU 36 0.0121

GLU 36 TYR 37 -0.0002

TYR 37 ASN 38 0.0308

ASN 38 LYS 39 0.0001

LYS 39 SER 40 -0.0880

SER 40 VAL 41 0.0003

VAL 41 GLN 42 0.0138

GLN 42 GLU 43 -0.0001

GLU 43 ILE 44 0.0297

ILE 44 GLN 45 0.0001

GLN 45 ALA 46 0.0161

ALA 46 THR 47 0.0003

THR 47 PHE 48 0.0008

PHE 48 PHE 49 0.0002

PHE 49 TYR 50 -0.0108

TYR 50 PHE 51 0.0002

PHE 51 THR 52 -0.0096

THR 52 PRO 53 -0.0000

PRO 53 ASN 54 -0.0118

ASN 54 LYS 55 0.0002

LYS 55 THR 56 -0.0058

THR 56 GLU 57 -0.0000

GLU 57 ASP 58 0.0249

ASP 58 THR 59 -0.0002

THR 59 ILE 60 -0.0080

ILE 60 PHE 61 -0.0003

PHE 61 LEU 62 0.0004

LEU 62 ARG 63 0.0001

ARG 63 GLU 64 0.0057

GLU 64 TYR 65 0.0005

TYR 65 GLN 66 -0.0026

GLN 66 THR 67 0.0000

THR 67 ARG 68 -0.0206

ARG 68 GLN 69 -0.0001

GLN 69 ASN 70 -0.0062

ASN 70 GLN 71 -0.0002

GLN 71 CYS 72 -0.0060

CYS 72 PHE 73 0.0000

PHE 73 TYR 74 0.0008

TYR 74 ASN 75 0.0002

ASN 75 SER 76 0.0099

SER 76 SER 77 -0.0001

SER 77 TYR 78 0.0113

TYR 78 LEU 79 0.0001

LEU 79 ASN 80 -0.0157

ASN 80 VAL 81 -0.0003

VAL 81 GLN 82 0.0109

GLN 82 ARG 83 0.0001

ARG 83 GLU 84 0.0184

GLU 84 ASN 85 0.0002

ASN 85 GLY 86 0.0002

GLY 86 THR 87 0.0003

THR 87 VAL 88 -0.0252

VAL 88 SER 89 0.0002

SER 89 ARG 90 -0.1076

ARG 90 TYR 91 -0.0002

TYR 91 GLU 92 -0.0442

GLU 92 GLY 93 -0.0002

GLY 93 GLY 94 0.0881

GLY 94 ARG 95 -0.0001

ARG 95 GLU 96 -0.1136

GLU 96 HIS 97 -0.0000

HIS 97 VAL 98 -0.1313

VAL 98 ALA 99 0.0000

ALA 99 HIS 100 -0.0847

HIS 100 LEU 101 -0.0002

LEU 101 LEU 102 -0.0291

LEU 102 PHE 103 0.0005

PHE 103 LEU 104 -0.0231

LEU 104 ARG 105 -0.0001

ARG 105 ASP 106 0.0282

ASP 106 THR 107 -0.0003

THR 107 LYS 108 -0.0005

LYS 108 THR 109 -0.0003

THR 109 LEU 110 -0.0100

LEU 110 MET 111 -0.0001

MET 111 PHE 112 -0.0151

PHE 112 GLY 113 -0.0000

GLY 113 SER 114 0.0030

SER 114 TYR 115 -0.0002

TYR 115 LEU 116 -0.0376

LEU 116 ASP 117 0.0000

ASP 117 ASP 118 0.0136

ASP 118 GLU 119 0.0003

GLU 119 LYS 120 -0.0048

LYS 120 ASN 121 -0.0003

ASN 121 TRP 122 0.0014

TRP 122 GLY 123 -0.0001

GLY 123 LEU 124 0.0096

LEU 124 SER 125 -0.0001

SER 125 PHE 126 -0.0013

PHE 126 TYR 127 0.0002

TYR 127 ALA 128 0.0000

ALA 128 ASP 129 0.0002

ASP 129 LYS 130 -0.0165

LYS 130 PRO 131 -0.0001

PRO 131 GLU 132 0.0197

GLU 132 THR 133 0.0003

THR 133 THR 134 0.0065

THR 134 LYS 135 -0.0001

LYS 135 GLU 136 0.0011

GLU 136 GLN 137 0.0003

GLN 137 LEU 138 -0.0080

LEU 138 GLY 139 -0.0002

GLY 139 GLU 140 -0.0087

GLU 140 PHE 141 -0.0001

PHE 141 TYR 142 0.0088

TYR 142 GLU 143 -0.0002

GLU 143 ALA 144 -0.0069

ALA 144 LEU 145 -0.0001

LEU 145 ASP 146 -0.0068

ASP 146 CYS 147 0.0001

CYS 147 LEU 148 -0.0202

LEU 148 ARG 149 0.0002

ARG 149 ILE 150 -0.0078

ILE 150 PRO 151 -0.0001

PRO 151 ARG 152 0.0123

ARG 152 SER 153 -0.0001

SER 153 ASP 154 -0.0102

ASP 154 VAL 155 -0.0000

VAL 155 MET 156 -0.0407

MET 156 TYR 157 -0.0000

TYR 157 THR 158 0.0262

THR 158 ASP 159 -0.0002

ASP 159 TRP 160 0.0297

TRP 160 LYS 161 0.0002

LYS 161 LYS 162 -0.0040

LYS 162 ASP 163 0.0003

ASP 163 LYS 164 0.0053

LYS 164 CYS 165 -0.0001

CYS 165 GLU 166 -0.0212

GLU 166 PRO 167 -0.0001

PRO 167 LEU 168 0.0450

LEU 168 GLU 169 0.0001

GLU 169 LYS 170 0.0275

LYS 170 GLN 171 0.0004

GLN 171 HIS 172 0.0056

HIS 172 GLU 173 -0.0002

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.

*** TRANSPORT PROTEIN 21-OCT-10 3APU ***

CA strain for 240110225702578652

--- normal mode 7 ---

Should you encounter any unexpected behaviour,
please let us know.

* TRANSPORT PROTEIN 21-OCT-10 3APU *