This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASN 106
GLU 107
0.0147
GLU 107
PRO 108
-0.0873
PRO 108
VAL 109
-0.0120
VAL 109
PHE 110
0.0115
PHE 110
THR 111
-0.0943
THR 111
GLN 112
0.1169
GLN 112
ASP 113
-0.0089
ASP 113
VAL 114
0.0905
VAL 114
PHE 115
0.0074
PHE 115
VAL 116
0.0746
VAL 116
GLY 117
0.0826
GLY 117
SER 118
0.0461
SER 118
VAL 119
0.1157
VAL 119
GLU 120
-0.0544
GLU 120
GLU 121
-0.0307
GLU 121
LEU 122
0.0201
LEU 122
SER 123
-0.1301
SER 123
ALA 124
0.0590
ALA 124
ALA 125
-0.0134
ALA 125
HIS 126
-0.0966
HIS 126
THR 127
-0.0529
THR 127
LEU 128
-0.0518
LEU 128
VAL 129
0.0049
VAL 129
MET 130
-0.0283
MET 130
LYS 131
-0.1331
LYS 131
ILE 132
-0.0109
ILE 132
ASN 133
-0.0241
ASN 133
ALA 134
-0.0358
ALA 134
THR 135
0.0625
THR 135
ASP 136
0.2657
ASP 136
ALA 137
-0.1656
ALA 137
ASP 138
0.1495
ASP 138
GLU 139
-0.0944
GLU 139
PRO 140
-0.0295
PRO 140
ASN 141
0.0956
ASN 141
THR 142
-0.0988
THR 142
LEU 143
-0.2445
LEU 143
ASN 144
0.2202
ASN 144
SER 145
0.1571
SER 145
LYS 146
-0.1808
LYS 146
ILE 147
0.4158
ILE 147
SER 148
0.0982
SER 148
TYR 149
0.0682
TYR 149
ARG 150
0.0939
ARG 150
ILE 151
0.2111
ILE 151
VAL 152
-0.1042
VAL 152
SER 153
0.3252
SER 153
LEU 154
0.1321
LEU 154
GLU 155
0.1217
GLU 155
PRO 156
0.0833
PRO 156
ALA 157
0.1158
ALA 157
TYR 158
0.0710
TYR 158
PRO 159
0.0132
PRO 159
PRO 160
0.0587
PRO 160
VAL 161
0.0048
VAL 161
PHE 162
0.0460
PHE 162
TYR 163
0.0780
TYR 163
LEU 164
-0.0397
LEU 164
ASN 165
0.0657
ASN 165
LYS 166
-0.1757
LYS 166
ASP 167
0.0847
ASP 167
THR 168
-0.0279
THR 168
GLY 169
0.0383
GLY 169
GLU 170
-0.1033
GLU 170
ILE 171
0.0023
ILE 171
TYR 172
-0.0048
TYR 172
THR 173
-0.0751
THR 173
THR 174
0.0292
THR 174
SER 175
-0.0349
SER 175
VAL 176
0.0146
VAL 176
THR 177
-0.0161
THR 177
LEU 178
0.0139
LEU 178
ASP 179
-0.0570
ASP 179
ARG 180
-0.0204
ARG 180
GLU 181
-0.0204
GLU 181
GLU 182
0.0820
GLU 182
HIS 183
0.0662
HIS 183
SER 184
-0.0940
SER 184
SER 185
0.2519
SER 185
TYR 186
0.0780
TYR 186
THR 187
0.2155
THR 187
LEU 188
0.1174
LEU 188
THR 189
0.2188
THR 189
VAL 190
0.0634
VAL 190
GLU 191
0.1843
GLU 191
ALA 192
0.1778
ALA 192
ARG 193
0.0009
ARG 193
ASP 194
-0.0714
ASP 194
GLY 195
-0.0340
GLY 195
ASN 196
0.0442
ASN 196
GLY 197
-0.0849
GLY 197
GLU 198
-0.0200
GLU 198
VAL 199
-0.0969
VAL 199
THR 200
0.0370
THR 200
ASP 201
-0.1393
ASP 201
LYS 202
-0.1498
LYS 202
PRO 203
-0.0098
PRO 203
VAL 204
0.0112
VAL 204
LYS 205
0.0045
LYS 205
GLN 206
0.1980
GLN 206
ALA 207
0.1001
ALA 207
GLN 208
0.1934
GLN 208
VAL 209
0.0868
VAL 209
GLN 210
0.1245
GLN 210
ILE 211
0.1427
ILE 211
ARG 212
0.1231
ARG 212
ILE 213
0.0520
ILE 213
LEU 214
0.0529
LEU 214
ASP 215
-0.0118
ASP 215
VAL 216
0.0531
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.