CNRS Nantes University US2B US2B
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***  d2  ***

CA strain for 2401140716061035985

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 106GLU 107 -0.0005
GLU 107PRO 108 -0.0025
PRO 108VAL 109 0.0841
VAL 109PHE 110 0.1864
PHE 110THR 111 -0.0753
THR 111GLN 112 -0.0072
GLN 112ASP 113 -0.0595
ASP 113VAL 114 0.1583
VAL 114PHE 115 -0.0247
PHE 115VAL 116 0.2408
VAL 116GLY 117 0.1781
GLY 117SER 118 0.2374
SER 118VAL 119 0.1493
VAL 119GLU 120 0.0478
GLU 120GLU 121 0.0060
GLU 121LEU 122 0.0187
LEU 122SER 123 -0.0611
SER 123ALA 124 0.0087
ALA 124ALA 125 -0.0425
ALA 125HIS 126 -0.0754
HIS 126THR 127 -0.0843
THR 127LEU 128 0.1290
LEU 128VAL 129 -0.0487
VAL 129MET 130 0.1609
MET 130LYS 131 0.0308
LYS 131ILE 132 0.1216
ILE 132ASN 133 0.0861
ASN 133ALA 134 0.0747
ALA 134THR 135 0.0104
THR 135ASP 136 -0.0096
ASP 136ALA 137 0.0118
ALA 137ASP 138 -0.0220
ASP 138GLU 139 0.0853
GLU 139PRO 140 0.0124
PRO 140ASN 141 -0.0274
ASN 141THR 142 0.0780
THR 142LEU 143 0.1371
LEU 143ASN 144 -0.0752
ASN 144SER 145 -0.0623
SER 145LYS 146 0.0098
LYS 146ILE 147 -0.1293
ILE 147SER 148 -0.0182
SER 148TYR 149 -0.0648
TYR 149ARG 150 0.0381
ARG 150ILE 151 -0.0630
ILE 151VAL 152 -0.0971
VAL 152SER 153 -0.0364
SER 153LEU 154 -0.0850
LEU 154GLU 155 0.0133
GLU 155PRO 156 -0.0194
PRO 156ALA 157 -0.0627
ALA 157TYR 158 -0.1209
TYR 158PRO 159 0.0060
PRO 159PRO 160 0.0124
PRO 160VAL 161 0.0144
VAL 161PHE 162 -0.0966
PHE 162TYR 163 0.0730
TYR 163LEU 164 -0.2692
LEU 164ASN 165 0.1082
ASN 165LYS 166 -0.3342
LYS 166ASP 167 0.0133
ASP 167THR 168 -0.0975
THR 168GLY 169 0.0272
GLY 169GLU 170 -0.0342
GLU 170ILE 171 0.0019
ILE 171TYR 172 0.0326
TYR 172THR 173 -0.0807
THR 173THR 174 0.0665
THR 174SER 175 -0.1042
SER 175VAL 176 0.0479
VAL 176THR 177 -0.0359
THR 177LEU 178 0.0522
LEU 178ASP 179 -0.0543
ASP 179ARG 180 0.0146
ARG 180GLU 181 0.0112
GLU 181GLU 182 -0.0124
GLU 182HIS 183 0.0267
HIS 183SER 184 -0.0177
SER 184SER 185 0.1280
SER 185TYR 186 0.0023
TYR 186THR 187 0.1036
THR 187LEU 188 0.0682
LEU 188THR 189 0.0856
THR 189VAL 190 0.0090
VAL 190GLU 191 0.0717
GLU 191ALA 192 -0.0602
ALA 192ARG 193 0.1231
ARG 193ASP 194 0.0496
ASP 194GLY 195 0.0836
GLY 195ASN 196 -0.0196
ASN 196GLY 197 0.0387
GLY 197GLU 198 -0.1159
GLU 198VAL 199 0.1010
VAL 199THR 200 -0.1208
THR 200ASP 201 -0.0358
ASP 201LYS 202 0.0699
LYS 202PRO 203 0.0586
PRO 203VAL 204 -0.0029
VAL 204LYS 205 0.1204
LYS 205GLN 206 0.0109
GLN 206ALA 207 0.2351
ALA 207GLN 208 0.1249
GLN 208VAL 209 0.1161
VAL 209GLN 210 0.1134
GLN 210ILE 211 0.1404
ILE 211ARG 212 0.0685
ARG 212ILE 213 0.1184
ILE 213LEU 214 -0.0052
LEU 214ASP 215 0.0466
ASP 215VAL 216 0.0602

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.