This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 1
SER 2
0.1710
SER 2
PRO 3
-0.2371
PRO 3
GLU 4
0.0237
GLU 4
VAL 5
0.0370
VAL 5
GLN 6
-0.0471
GLN 6
ILE 7
-0.0507
ILE 7
ALA 8
0.0825
ALA 8
ILE 9
-0.1029
ILE 9
LEU 10
-0.1332
LEU 10
THR 11
-0.0904
THR 11
GLU 12
-0.1012
GLU 12
GLN 13
-0.1520
GLN 13
ILE 14
0.1550
ILE 14
ASN 15
0.1037
ASN 15
ASN 16
-0.2702
ASN 16
LEU 17
0.2483
LEU 17
ASN 18
-0.0409
ASN 18
GLU 19
-0.2014
GLU 19
HIS 20
0.0952
HIS 20
LEU 21
0.0981
LEU 21
ARG 22
-0.1071
ARG 22
VAL 23
-0.1030
VAL 23
HIS 24
0.1791
HIS 24
LYS 25
-0.0883
LYS 25
LYS 26
0.1637
LYS 26
ASP 27
-0.1596
ASP 27
HIS 28
-0.0134
HIS 28
HIS 29
-0.1937
HIS 29
SER 30
0.4282
SER 30
ARG 31
0.0928
ARG 31
ARG 32
-0.1538
ARG 32
GLY 33
0.3387
GLY 33
LEU 34
0.1478
LEU 34
LEU 35
-0.2036
LEU 35
LYS 36
0.4516
LYS 36
MET 37
0.0289
MET 37
VAL 38
-0.0276
VAL 38
GLY 39
0.2068
GLY 39
LYS 40
-0.0214
LYS 40
ARG 41
-0.1126
ARG 41
ARG 42
0.1066
ARG 42
ARG 43
0.1006
ARG 43
LEU 44
-0.2842
LEU 44
LEU 45
0.0879
LEU 45
ALA 46
0.0515
ALA 46
TYR 47
-0.0130
TYR 47
LEU 48
-0.1252
LEU 48
ARG 49
0.0093
ARG 49
ASN 50
-0.0102
ASN 50
LYS 51
-0.0453
LYS 51
ASP 52
-0.0430
ASP 52
VAL 53
-0.0297
VAL 53
ALA 54
-0.0257
ALA 54
ARG 55
0.0842
ARG 55
TYR 56
0.1191
TYR 56
ARG 57
0.1043
ARG 57
GLU 58
0.0418
GLU 58
ILE 59
0.1299
ILE 59
VAL 60
-0.0332
VAL 60
GLU 61
0.0486
GLU 61
LYS 62
0.0504
LYS 62
LEU 63
-0.1793
LEU 63
GLY 64
0.2519
GLY 64
LEU 65
0.0769
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.