This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 1
SER 2
0.1115
SER 2
PRO 3
-0.2307
PRO 3
GLU 4
0.1456
GLU 4
VAL 5
-0.2005
VAL 5
GLN 6
-0.0142
GLN 6
ILE 7
-0.0597
ILE 7
ALA 8
0.0942
ALA 8
ILE 9
-0.1222
ILE 9
LEU 10
0.0260
LEU 10
THR 11
-0.0480
THR 11
GLU 12
-0.0210
GLU 12
GLN 13
0.0394
GLN 13
ILE 14
0.0936
ILE 14
ASN 15
-0.0515
ASN 15
ASN 16
0.1637
ASN 16
LEU 17
0.0530
LEU 17
ASN 18
0.0038
ASN 18
GLU 19
0.2397
GLU 19
HIS 20
0.0316
HIS 20
LEU 21
-0.0234
LEU 21
ARG 22
0.0708
ARG 22
VAL 23
0.0792
VAL 23
HIS 24
-0.1050
HIS 24
LYS 25
0.0128
LYS 25
LYS 26
0.1822
LYS 26
ASP 27
0.0396
ASP 27
HIS 28
0.1978
HIS 28
HIS 29
0.1627
HIS 29
SER 30
-0.3695
SER 30
ARG 31
-0.1537
ARG 31
ARG 32
0.2405
ARG 32
GLY 33
-0.0406
GLY 33
LEU 34
-0.2186
LEU 34
LEU 35
0.1215
LEU 35
LYS 36
0.3182
LYS 36
MET 37
-0.1602
MET 37
VAL 38
0.0068
VAL 38
GLY 39
0.0175
GLY 39
LYS 40
-0.2995
LYS 40
ARG 41
0.0207
ARG 41
ARG 42
0.2040
ARG 42
ARG 43
-0.1306
ARG 43
LEU 44
-0.2597
LEU 44
LEU 45
-0.0064
LEU 45
ALA 46
0.0076
ALA 46
TYR 47
-0.1739
TYR 47
LEU 48
-0.0194
LEU 48
ARG 49
-0.1081
ARG 49
ASN 50
-0.0518
ASN 50
LYS 51
-0.0292
LYS 51
ASP 52
-0.0110
ASP 52
VAL 53
-0.0217
VAL 53
ALA 54
-0.0393
ALA 54
ARG 55
0.0577
ARG 55
TYR 56
-0.0134
TYR 56
ARG 57
0.0420
ARG 57
GLU 58
-0.0147
GLU 58
ILE 59
0.0956
ILE 59
VAL 60
-0.0787
VAL 60
GLU 61
0.0150
GLU 61
LYS 62
-0.0679
LYS 62
LEU 63
-0.0039
LEU 63
GLY 64
0.1415
GLY 64
LEU 65
-0.1286
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.