This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 1
SER 2
0.0103
SER 2
PRO 3
-0.0117
PRO 3
GLU 4
-0.0133
GLU 4
VAL 5
0.0475
VAL 5
GLN 6
0.0214
GLN 6
ILE 7
-0.0125
ILE 7
ALA 8
-0.0215
ALA 8
ILE 9
0.1010
ILE 9
LEU 10
-0.0972
LEU 10
THR 11
-0.0185
THR 11
GLU 12
0.0953
GLU 12
GLN 13
-0.0278
GLN 13
ILE 14
-0.0787
ILE 14
ASN 15
0.1284
ASN 15
ASN 16
-0.1042
ASN 16
LEU 17
-0.0943
LEU 17
ASN 18
0.0390
ASN 18
GLU 19
0.0234
GLU 19
HIS 20
-0.0391
HIS 20
LEU 21
-0.0090
LEU 21
ARG 22
0.0397
ARG 22
VAL 23
0.0009
VAL 23
HIS 24
-0.0505
HIS 24
LYS 25
0.0292
LYS 25
LYS 26
-0.0138
LYS 26
ASP 27
0.0188
ASP 27
HIS 28
0.0157
HIS 28
HIS 29
0.0166
HIS 29
SER 30
-0.0334
SER 30
ARG 31
-0.0253
ARG 31
ARG 32
0.0941
ARG 32
GLY 33
-0.0094
GLY 33
LEU 34
-0.0710
LEU 34
LEU 35
0.1620
LEU 35
LYS 36
0.0276
LYS 36
MET 37
-0.0889
MET 37
VAL 38
-0.0073
VAL 38
GLY 39
0.1459
GLY 39
LYS 40
-0.1671
LYS 40
ARG 41
0.0228
ARG 41
ARG 42
0.0456
ARG 42
ARG 43
-0.0001
ARG 43
LEU 44
-0.0728
LEU 44
LEU 45
0.0480
LEU 45
ALA 46
0.0024
ALA 46
TYR 47
-0.0042
TYR 47
LEU 48
-0.0119
LEU 48
ARG 49
0.0065
ARG 49
ASN 50
-0.0015
ASN 50
LYS 51
-0.0050
LYS 51
ASP 52
-0.0039
ASP 52
VAL 53
-0.0018
VAL 53
ALA 54
0.0001
ALA 54
ARG 55
-0.0007
ARG 55
TYR 56
0.0305
TYR 56
ARG 57
0.0045
ARG 57
GLU 58
0.0008
GLU 58
ILE 59
0.0244
ILE 59
VAL 60
0.0106
VAL 60
GLU 61
0.0091
GLU 61
LYS 62
0.0229
LYS 62
LEU 63
0.0150
LEU 63
GLY 64
-0.0227
GLY 64
LEU 65
0.0064
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.