This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 1
SER 2
0.0297
SER 2
PRO 3
-0.0461
PRO 3
GLU 4
-0.0053
GLU 4
VAL 5
0.0115
VAL 5
GLN 6
-0.0250
GLN 6
ILE 7
0.0023
ILE 7
ALA 8
0.0399
ALA 8
ILE 9
-0.0377
ILE 9
LEU 10
-0.0999
LEU 10
THR 11
-0.0398
THR 11
GLU 12
-0.0099
GLU 12
GLN 13
-0.1098
GLN 13
ILE 14
0.0079
ILE 14
ASN 15
0.0752
ASN 15
ASN 16
-0.1979
ASN 16
LEU 17
-0.0587
LEU 17
ASN 18
0.0405
ASN 18
GLU 19
-0.0755
GLU 19
HIS 20
-0.0828
HIS 20
LEU 21
-0.0015
LEU 21
ARG 22
-0.0100
ARG 22
VAL 23
-0.0170
VAL 23
HIS 24
-0.0152
HIS 24
LYS 25
0.0033
LYS 25
LYS 26
-0.0426
LYS 26
ASP 27
0.0372
ASP 27
HIS 28
-0.0274
HIS 28
HIS 29
0.0290
HIS 29
SER 30
-0.0638
SER 30
ARG 31
0.0108
ARG 31
ARG 32
-0.0014
ARG 32
GLY 33
-0.1465
GLY 33
LEU 34
-0.0002
LEU 34
LEU 35
0.0629
LEU 35
LYS 36
-0.2264
LYS 36
MET 37
-0.0422
MET 37
VAL 38
0.0855
VAL 38
GLY 39
-0.1829
GLY 39
LYS 40
-0.0673
LYS 40
ARG 41
-0.0183
ARG 41
ARG 42
0.0339
ARG 42
ARG 43
-0.0375
ARG 43
LEU 44
-0.0095
LEU 44
LEU 45
0.0017
LEU 45
ALA 46
-0.0142
ALA 46
TYR 47
-0.0119
TYR 47
LEU 48
0.0022
LEU 48
ARG 49
0.0032
ARG 49
ASN 50
-0.0095
ASN 50
LYS 51
-0.0062
LYS 51
ASP 52
-0.0117
ASP 52
VAL 53
-0.0059
VAL 53
ALA 54
-0.0075
ALA 54
ARG 55
0.0220
ARG 55
TYR 56
0.0086
TYR 56
ARG 57
0.0292
ARG 57
GLU 58
0.0169
GLU 58
ILE 59
0.0082
ILE 59
VAL 60
0.0041
VAL 60
GLU 61
-0.0054
GLU 61
LYS 62
-0.0029
LYS 62
LEU 63
-0.0718
LEU 63
GLY 64
0.1164
GLY 64
LEU 65
0.0965
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.