This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLY 1
SER 2
-0.0011
SER 2
PRO 3
0.0477
PRO 3
GLU 4
0.0763
GLU 4
VAL 5
-0.0430
VAL 5
GLN 6
0.0933
GLN 6
ILE 7
0.0390
ILE 7
ALA 8
-0.1749
ALA 8
ILE 9
0.2518
ILE 9
LEU 10
0.0199
LEU 10
THR 11
0.0336
THR 11
GLU 12
0.1441
GLU 12
GLN 13
0.1413
GLN 13
ILE 14
0.0004
ILE 14
ASN 15
0.1147
ASN 15
ASN 16
0.0527
ASN 16
LEU 17
0.0097
LEU 17
ASN 18
0.0807
ASN 18
GLU 19
0.0492
GLU 19
HIS 20
-0.0496
HIS 20
LEU 21
-0.0105
LEU 21
ARG 22
0.0331
ARG 22
VAL 23
0.0257
VAL 23
HIS 24
0.0394
HIS 24
LYS 25
-0.0442
LYS 25
LYS 26
0.0506
LYS 26
ASP 27
0.0909
ASP 27
HIS 28
-0.1595
HIS 28
HIS 29
-0.0196
HIS 29
SER 30
-0.0606
SER 30
ARG 31
0.0207
ARG 31
ARG 32
-0.0794
ARG 32
GLY 33
-0.0902
GLY 33
LEU 34
0.0927
LEU 34
LEU 35
-0.1474
LEU 35
LYS 36
-0.1856
LYS 36
MET 37
0.0379
MET 37
VAL 38
-0.0606
VAL 38
GLY 39
0.0416
GLY 39
LYS 40
-0.1535
LYS 40
ARG 41
-0.0379
ARG 41
ARG 42
-0.0529
ARG 42
ARG 43
-0.0471
ARG 43
LEU 44
-0.0877
LEU 44
LEU 45
-0.0294
LEU 45
ALA 46
-0.0448
ALA 46
TYR 47
-0.0624
TYR 47
LEU 48
-0.0004
LEU 48
ARG 49
-0.1208
ARG 49
ASN 50
-0.0248
ASN 50
LYS 51
0.0072
LYS 51
ASP 52
0.0231
ASP 52
VAL 53
0.0063
VAL 53
ALA 54
0.0116
ALA 54
ARG 55
-0.0133
ARG 55
TYR 56
-0.0088
TYR 56
ARG 57
-0.0434
ARG 57
GLU 58
-0.0255
GLU 58
ILE 59
0.0499
ILE 59
VAL 60
0.0195
VAL 60
GLU 61
0.0207
GLU 61
LYS 62
-0.0049
LYS 62
LEU 63
0.1367
LEU 63
GLY 64
-0.0546
GLY 64
LEU 65
-0.0949
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.