CNRS Nantes University US2B US2B
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***  A5SZQ  ***

CA strain for 2401182157531717838

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1ALA 2 0.0337
ALA 2PRO 3 -0.0564
PRO 3VAL 4 -0.0445
VAL 4PHE 5 0.2931
PHE 5THR 6 -0.1433
THR 6GLN 7 -0.1023
GLN 7PRO 8 0.0624
PRO 8GLU 9 0.1183
GLU 9TYR 10 -0.0292
TYR 10HIS 11 0.0178
HIS 11ILE 12 0.0678
ILE 12SER 13 -0.0339
SER 13VAL 14 0.0024
VAL 14LYS 15 -0.0173
LYS 15GLU 16 0.0430
GLU 16ASN 17 0.0037
ASN 17LEU 18 -0.0043
LEU 18PRO 19 -0.0224
PRO 19VAL 20 -0.0750
VAL 20GLY 21 -0.1146
GLY 21THR 22 -0.0089
THR 22ARG 23 0.0591
ARG 23LEU 24 -0.1244
LEU 24LEU 25 0.0427
LEU 25THR 26 -0.0762
THR 26ILE 27 -0.0809
ILE 27LYS 28 -0.1287
LYS 28ALA 29 -0.3298
ALA 29THR 30 -0.0171
THR 30ASP 31 -0.2128
ASP 31PRO 32 0.0063
PRO 32ASP 33 0.0247
ASP 33GLU 34 0.0248

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.