CNRS Nantes University US2B US2B
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***  A5SZQ  ***

CA strain for 2401182157531717838

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1ALA 2 -0.0287
ALA 2PRO 3 -0.0505
PRO 3VAL 4 0.1124
VAL 4PHE 5 -0.2014
PHE 5THR 6 0.1750
THR 6GLN 7 -0.1194
GLN 7PRO 8 -0.0304
PRO 8GLU 9 -0.0297
GLU 9TYR 10 -0.0852
TYR 10HIS 11 0.0742
HIS 11ILE 12 -0.0310
ILE 12SER 13 -0.0145
SER 13VAL 14 -0.0626
VAL 14LYS 15 -0.0004
LYS 15GLU 16 -0.0148
GLU 16ASN 17 0.0364
ASN 17LEU 18 -0.0416
LEU 18PRO 19 0.0234
PRO 19VAL 20 -0.0488
VAL 20GLY 21 -0.0309
GLY 21THR 22 0.0015
THR 22ARG 23 0.1345
ARG 23LEU 24 -0.0722
LEU 24LEU 25 0.0644
LEU 25THR 26 0.0897
THR 26ILE 27 0.0109
ILE 27LYS 28 0.1659
LYS 28ALA 29 0.0328
ALA 29THR 30 0.2448
THR 30ASP 31 -0.1242
ASP 31PRO 32 0.0416
PRO 32ASP 33 -0.0373
ASP 33GLU 34 -0.0121

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.