This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASN 1
ALA 2
-0.0287
ALA 2
PRO 3
-0.0505
PRO 3
VAL 4
0.1124
VAL 4
PHE 5
-0.2014
PHE 5
THR 6
0.1750
THR 6
GLN 7
-0.1194
GLN 7
PRO 8
-0.0304
PRO 8
GLU 9
-0.0297
GLU 9
TYR 10
-0.0852
TYR 10
HIS 11
0.0742
HIS 11
ILE 12
-0.0310
ILE 12
SER 13
-0.0145
SER 13
VAL 14
-0.0626
VAL 14
LYS 15
-0.0004
LYS 15
GLU 16
-0.0148
GLU 16
ASN 17
0.0364
ASN 17
LEU 18
-0.0416
LEU 18
PRO 19
0.0234
PRO 19
VAL 20
-0.0488
VAL 20
GLY 21
-0.0309
GLY 21
THR 22
0.0015
THR 22
ARG 23
0.1345
ARG 23
LEU 24
-0.0722
LEU 24
LEU 25
0.0644
LEU 25
THR 26
0.0897
THR 26
ILE 27
0.0109
ILE 27
LYS 28
0.1659
LYS 28
ALA 29
0.0328
ALA 29
THR 30
0.2448
THR 30
ASP 31
-0.1242
ASP 31
PRO 32
0.0416
PRO 32
ASP 33
-0.0373
ASP 33
GLU 34
-0.0121
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.