CNRS Nantes University US2B US2B
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***  A5SZQ  ***

CA strain for 2401182157531717838

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1ALA 2 0.0037
ALA 2PRO 3 0.0046
PRO 3VAL 4 -0.0144
VAL 4PHE 5 0.0038
PHE 5THR 6 -0.0124
THR 6GLN 7 -0.0097
GLN 7PRO 8 0.0072
PRO 8GLU 9 0.0045
GLU 9TYR 10 0.0449
TYR 10HIS 11 -0.0616
HIS 11ILE 12 -0.0220
ILE 12SER 13 -0.0110
SER 13VAL 14 -0.0208
VAL 14LYS 15 -0.0004
LYS 15GLU 16 -0.0064
GLU 16ASN 17 0.0051
ASN 17LEU 18 -0.0010
LEU 18PRO 19 0.0082
PRO 19VAL 20 0.0032
VAL 20GLY 21 0.0054
GLY 21THR 22 -0.0008
THR 22ARG 23 0.0399
ARG 23LEU 24 -0.0232
LEU 24LEU 25 0.0101
LEU 25THR 26 0.0802
THR 26ILE 27 -0.0376
ILE 27LYS 28 0.0256
LYS 28ALA 29 -0.0108
ALA 29THR 30 0.0210
THR 30ASP 31 -0.0114
ASP 31PRO 32 0.0064
PRO 32ASP 33 -0.0072
ASP 33GLU 34 0.0007

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.