CNRS Nantes University US2B US2B
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***  A5SZQ  ***

CA strain for 2401182157531717838

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1ALA 2 -0.0005
ALA 2PRO 3 0.0168
PRO 3VAL 4 -0.0051
VAL 4PHE 5 -0.0311
PHE 5THR 6 0.0128
THR 6GLN 7 0.0164
GLN 7PRO 8 -0.0207
PRO 8GLU 9 -0.0410
GLU 9TYR 10 0.0275
TYR 10HIS 11 -0.0493
HIS 11ILE 12 -0.0721
ILE 12SER 13 0.0040
SER 13VAL 14 -0.1216
VAL 14LYS 15 0.0315
LYS 15GLU 16 0.0131
GLU 16ASN 17 0.0086
ASN 17LEU 18 -0.0010
LEU 18PRO 19 -0.0047
PRO 19VAL 20 -0.0235
VAL 20GLY 21 -0.1142
GLY 21THR 22 -0.0024
THR 22ARG 23 -0.0169
ARG 23LEU 24 -0.0690
LEU 24LEU 25 0.0284
LEU 25THR 26 0.0972
THR 26ILE 27 -0.0453
ILE 27LYS 28 0.0822
LYS 28ALA 29 0.0294
ALA 29THR 30 0.0138
THR 30ASP 31 0.0350
ASP 31PRO 32 -0.0042
PRO 32ASP 33 -0.0054
ASP 33GLU 34 -0.0013

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.