CNRS Nantes University US2B US2B
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***  A5SZQ  ***

CA strain for 2401182157531717838

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASN 1ALA 2 -0.0015
ALA 2PRO 3 0.0282
PRO 3VAL 4 0.0006
VAL 4PHE 5 -0.2190
PHE 5THR 6 0.0754
THR 6GLN 7 -0.0556
GLN 7PRO 8 0.0328
PRO 8GLU 9 -0.0516
GLU 9TYR 10 0.0179
TYR 10HIS 11 -0.0322
HIS 11ILE 12 -0.0020
ILE 12SER 13 -0.0017
SER 13VAL 14 -0.0089
VAL 14LYS 15 -0.0138
LYS 15GLU 16 0.0159
GLU 16ASN 17 -0.0158
ASN 17LEU 18 0.0261
LEU 18PRO 19 -0.0688
PRO 19VAL 20 -0.0106
VAL 20GLY 21 0.0081
GLY 21THR 22 -0.0098
THR 22ARG 23 0.0831
ARG 23LEU 24 -0.0448
LEU 24LEU 25 0.0366
LEU 25THR 26 0.0183
THR 26ILE 27 0.2036
ILE 27LYS 28 0.1511
LYS 28ALA 29 0.1625
ALA 29THR 30 0.1872
THR 30ASP 31 0.0093
ASP 31PRO 32 0.0419
PRO 32ASP 33 -0.0408
ASP 33GLU 34 -0.0190

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.