This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ALA 2
0.0011
ALA 2
SER 3
-0.0010
SER 3
GLU 4
0.1947
GLU 4
THR 5
-0.0476
THR 5
ASN 6
-0.1246
ASN 6
PRO 7
-0.0920
PRO 7
THR 8
0.0473
THR 8
PHE 9
-0.0358
PHE 9
GLU 10
0.0807
GLU 10
VAL 11
0.0328
VAL 11
GLY 12
-0.0889
GLY 12
ASP 13
0.0524
ASP 13
HIS 14
-0.0768
HIS 14
GLU 15
0.0386
GLU 15
ALA 16
-0.0343
ALA 16
PHE 17
-0.0051
PHE 17
MET 18
-0.0005
MET 18
GLU 19
0.0086
GLU 19
PHE 20
0.0074
PHE 20
ALA 21
0.0543
ALA 21
LEU 22
-0.0047
LEU 22
THR 23
0.0136
THR 23
GLN 24
-0.0609
GLN 24
ALA 25
0.0803
ALA 25
LYS 26
-0.0256
LYS 26
ARG 27
-0.0070
ARG 27
SER 28
0.2326
SER 28
PRO 29
0.0078
PRO 29
PRO 30
-0.0183
PRO 30
ALA 31
0.0615
ALA 31
GLY 32
0.0238
GLY 32
ASN 33
0.0033
ASN 33
LYS 34
-0.0242
LYS 34
PHE 35
-0.0260
PHE 35
CYS 36
0.0841
CYS 36
VAL 37
0.0017
VAL 37
GLY 38
0.0362
GLY 38
ALA 39
-0.0060
ALA 39
VAL 40
0.0512
VAL 40
LEU 41
-0.0181
LEU 41
VAL 42
0.0609
VAL 42
ASP 43
0.0395
ASP 43
ALA 44
0.0131
ALA 44
ALA 45
-0.0856
ALA 45
LYS 46
-0.0177
LYS 46
GLY 47
-0.0120
GLY 47
LYS 48
-0.0065
LYS 48
VAL 49
0.1069
VAL 49
LEU 50
-0.0135
LEU 50
SER 51
0.1657
SER 51
THR 52
-0.0643
THR 52
GLY 53
0.1285
GLY 53
TYR 54
-0.0046
TYR 54
SER 55
0.0415
SER 55
LEU 56
-0.0293
LEU 56
GLU 57
0.0201
GLU 57
TYR 58
-0.0264
TYR 58
PRO 59
0.0854
PRO 59
ARG 60
0.0252
ARG 60
ASP 61
-0.0013
ASP 61
TYR 62
0.0418
TYR 62
LYS 63
-0.0083
LYS 63
GLY 64
0.0579
GLY 64
ASP 65
-0.0433
ASP 65
PRO 66
0.0242
PRO 66
GLY 67
0.0195
GLY 67
THR 68
0.0269
THR 68
THR 69
0.0165
THR 69
HIS 70
-0.0198
HIS 70
ALA 71
0.0630
ALA 71
GLU 72
-0.0172
GLU 72
GLN 73
-0.0065
GLN 73
CYS 74
0.0087
CYS 74
CYS 75
0.0578
CYS 75
PHE 76
-0.0568
PHE 76
ILE 77
0.0468
ILE 77
LYS 78
-0.0232
LYS 78
ILE 79
-0.0728
ILE 79
ALA 80
-0.0023
ALA 80
ASP 81
0.0560
ASP 81
GLU 82
0.0716
GLU 82
HIS 83
-0.0106
HIS 83
ASN 84
0.0265
ASN 84
LEU 85
0.0529
LEU 85
PRO 86
0.0649
PRO 86
GLU 87
-0.0073
GLU 87
GLU 88
-0.0593
GLU 88
ARG 89
0.0332
ARG 89
ILE 90
-0.0277
ILE 90
HIS 91
0.0204
HIS 91
GLU 92
0.0620
GLU 92
VAL 93
-0.0175
VAL 93
LEU 94
0.0416
LEU 94
PRO 95
0.0892
PRO 95
PRO 96
-0.0939
PRO 96
ASP 97
0.0365
ASP 97
THR 98
0.0246
THR 98
VAL 99
0.0701
VAL 99
LEU 100
0.0070
LEU 100
TYR 101
0.0414
TYR 101
THR 102
-0.0238
THR 102
THR 103
0.0045
THR 103
MET 104
0.0210
MET 104
GLU 105
0.0362
GLU 105
PRO 106
0.0067
PRO 106
CYS 107
-0.0267
CYS 107
ASN 108
0.0067
ASN 108
GLU 109
-0.0362
GLU 109
ARG 110
-0.0123
ARG 110
LEU 111
-0.0189
LEU 111
SER 112
0.0183
SER 112
GLY 113
0.0173
GLY 113
ASN 114
0.0124
ASN 114
MET 115
-0.0559
MET 115
THR 116
0.0012
THR 116
CYS 117
0.0021
CYS 117
ALA 118
-0.0109
ALA 118
THR 119
0.0377
THR 119
ARG 120
0.0207
ARG 120
ILE 121
-0.0404
ILE 121
LEU 122
-0.0006
LEU 122
ARG 123
0.1378
ARG 123
LEU 124
-0.0689
LEU 124
LYS 125
0.0611
LYS 125
GLY 126
0.0077
GLY 126
ALA 127
-0.0568
ALA 127
ILE 128
0.0666
ILE 128
LYS 129
0.0290
LYS 129
THR 130
0.1276
THR 130
VAL 131
0.0119
VAL 131
TYR 132
0.0483
TYR 132
VAL 133
-0.0585
VAL 133
GLY 134
0.0520
GLY 134
ILE 135
-0.0367
ILE 135
ARG 136
0.0069
ARG 136
GLU 137
-0.0404
GLU 137
PRO 138
0.0224
PRO 138
GLY 139
-0.0237
GLY 139
THR 140
0.0080
THR 140
PHE 141
-0.0098
PHE 141
ILE 142
0.0382
ILE 142
ALA 143
0.0201
ALA 143
ASN 144
0.0122
ASN 144
ASN 145
-0.0580
ASN 145
ASP 146
0.0329
ASP 146
GLY 147
-0.0144
GLY 147
GLN 148
-0.0346
GLN 148
GLU 149
0.0207
GLU 149
ARG 150
0.0173
ARG 150
LEU 151
-0.0493
LEU 151
GLU 152
0.0106
GLU 152
ALA 153
0.0081
ALA 153
ASN 154
0.0131
ASN 154
GLY 155
-0.0569
GLY 155
VAL 156
0.0050
VAL 156
LYS 157
0.0602
LYS 157
VAL 158
0.0507
VAL 158
VAL 159
-0.0075
VAL 159
TYR 160
0.0988
TYR 160
PRO 161
-0.1134
PRO 161
VAL 162
0.0380
VAL 162
GLU 163
-0.0472
GLU 163
HIS 164
0.0450
HIS 164
TRP 165
-0.0108
TRP 165
ARG 166
-0.0128
ARG 166
ASP 167
0.0205
ASP 167
ARG 168
0.0068
ARG 168
ILE 169
0.0077
ILE 169
THR 170
-0.0048
THR 170
GLU 171
0.0291
GLU 171
ILE 172
-0.0097
ILE 172
SER 173
0.0390
SER 173
MET 174
0.0215
MET 174
ALA 175
0.0082
ALA 175
GLY 176
0.0403
GLY 176
HIS 177
0.0108
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.