CNRS Nantes University US2B US2B
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***  CME2  ***

CA strain for 240123140906140714

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 1GLY 2 0.0308
GLY 2GLY 3 -0.0131
GLY 3SER 4 -0.0100
SER 4ALA 5 -0.0002
ALA 5SER 6 0.0007
SER 6LEU 7 -0.0003
LEU 7GLN 8 -0.0001
GLN 8HIS 9 0.0008
HIS 9THR 10 -0.0002
THR 10ALA 11 -0.0008
ALA 11PRO 12 0.0011
PRO 12PHE 13 -0.0003
PHE 13GLY 14 0.0025
GLY 14CYS 15 0.0057
CYS 15GLN 16 0.0011
GLN 16ILE 17 0.0010
ILE 17ALA 18 0.0007
ALA 18THR 19 -0.0029
THR 19ASN 20 0.0018
ASN 20GLY 21 -0.0001
GLY 21GLY 22 0.0029
GLY 22GLY 23 -0.0010
GLY 23GLY 24 -0.0039
GLY 24GLY 25 0.0049
GLY 25ASN 26 0.0009
ASN 26TYR 27 -0.0010
TYR 27PRO 28 -0.0001
PRO 28ALA 29 0.0027
ALA 29SER 30 0.0007
SER 30HIS 31 0.0002
HIS 31THR 32 0.0005
THR 32THR 33 -0.0022
THR 33LEU 34 0.0022
LEU 34GLY 35 -0.0011
GLY 35VAL 36 -0.0016
VAL 36GLN 37 0.0003
GLN 37ASP 38 0.0003
ASP 38ILE 39 -0.0001
ILE 39GLY 40 0.0008
GLY 40GLY 41 0.0036
GLY 41GLY 42 0.0005
GLY 42GLY 43 0.0002
GLY 43GLY 44 -0.0035
GLY 44ILE 45 -0.0003
ILE 45GLN 46 -0.0022
GLN 46VAL 47 0.0035
VAL 47SER 48 0.0008
SER 48LEU 49 -0.0029
LEU 49GLN 50 -0.0001
GLN 50ILE 51 -0.0008
ILE 51GLY 52 0.0007
GLY 52ILE 53 0.0002
ILE 53LYS 54 0.0021
LYS 54THR 55 0.0007
THR 55ASP 56 -0.0002
ASP 56ASP 57 0.0003
ASP 57SER 58 -0.0003
SER 58HIS 59 0.0010
HIS 59ASP 60 -0.0001
ASP 60TRP 61 0.0001
TRP 61THR 62 -0.0008
THR 62GLY 63 0.0014
GLY 63GLY 64 0.0009
GLY 64GLY 65 -0.0044
GLY 65GLY 66 -0.0019
GLY 66GLY 67 0.0014
GLY 67THR 68 0.0000
THR 68SER 69 0.0005
SER 69ALA 70 -0.0008
ALA 70PRO 71 -0.0005
PRO 71CYS 72 0.0005
CYS 72THR 73 -0.0008
THR 73ILE 74 0.0012
ILE 74THR 75 -0.0043
THR 75GLY 76 0.0013
GLY 76THR 77 -0.0011
THR 77MET 78 0.0020
MET 78GLY 79 0.0015
GLY 79HIS 80 -0.0023
HIS 80PHE 81 0.0005
PHE 81GLY 82 0.0007
GLY 82GLY 83 -0.0007
GLY 83GLY 84 0.0063
GLY 84GLY 85 0.0010
GLY 85GLY 86 -0.0024
GLY 86HIS 87 -0.0036
HIS 87ALA 88 0.0020
ALA 88ALA 89 0.0002
ALA 89VAL 90 0.0029
VAL 90THR 91 0.0008
THR 91ASN 92 0.0000
ASN 92HIS 93 -0.0002
HIS 93LYS 94 0.0012
LYS 94LYS 95 -0.0000
LYS 95TRP 96 -0.0001
TRP 96GLN 97 0.0008
GLN 97TYR 98 0.0017
TYR 98ASN 99 -0.0005
ASN 99SER 100 0.0002
SER 100PRO 101 -0.0001
PRO 101LEU 102 0.0002
LEU 102VAL 103 -0.0001
VAL 103PRO 104 0.0000
PRO 104ARG 105 -0.0002
ARG 105ASN 106 -0.0003
ASN 106ALA 107 0.0002
ALA 107GLU 108 -0.0005
GLU 108LEU 109 -0.0002
LEU 109GLY 110 0.0009
GLY 110ASP 111 0.0004
ASP 111ARG 112 0.0001
ARG 112GLN 113 0.0006
GLN 113GLY 114 0.0013
GLY 114LYS 115 -0.0004
LYS 115ILE 116 -0.0011
ILE 116HIS 117 -0.0051
HIS 117ILE 118 -0.0149
ILE 118PRO 119 0.0063
PRO 119PHE 120 -0.0033
PHE 120GLY 121 -0.0172
GLY 121GLY 122 0.0123
GLY 122GLY 123 -0.0019
GLY 123GLY 124 0.0058
GLY 124GLY 125 0.0256
GLY 125LEU 126 0.0048
LEU 126LEU 127 0.0025
LEU 127SER 128 0.0017
SER 128MET 129 0.0086
MET 129VAL 130 0.0008
VAL 130GLY 131 0.0008
GLY 131MET 132 -0.0016
MET 132ALA 133 0.0006
ALA 133VAL 134 0.0010
VAL 134GLY 135 0.0046
GLY 135MET 136 -0.0060
MET 136CYS 137 0.0038
CYS 137MET 138 -0.0024
MET 138GLY 139 -0.0020
GLY 139GLY 140 -0.0044
GLY 140GLY 141 -0.0035
GLY 141GLY 142 -0.0059
GLY 142GLY 143 -0.0031
GLY 143VAL 144 0.0049
VAL 144VAL 145 -0.0009
VAL 145ASP 146 -0.0084
ASP 146THR 147 -0.0058
THR 147THR 148 -0.0004
THR 148GLY 149 0.0647
GLY 149SER 150 0.0457
SER 150THR 151 0.0043
THR 151LYS 152 0.0253
LYS 152PRO 153 -0.0094
PRO 153ASP 154 0.0008
ASP 154PRO 155 0.0083
PRO 155GLY 156 0.0926
GLY 156ASP 157 -0.0092
ASP 157ARG 158 0.0074
ARG 158SER 159 0.0348
SER 159HIS 160 0.0157
HIS 160HIS 161 -0.0585
HIS 161HIS 162 -0.0044
HIS 162HIS 163 -0.0148
HIS 163HIS 164 -0.0036
HIS 164HIS 165 -0.0058

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.