CNRS Nantes University US2B US2B
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***  1exr  ***

CA strain for 240124131923244126

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLU 2GLN 3 -0.0025
GLN 3LEU 4 -0.0043
LEU 4THR 5 -0.0044
THR 5GLU 6 -0.0001
GLU 6GLU 7 -0.0013
GLU 7GLN 8 -0.0003
GLN 8ILE 9 -0.0006
ILE 9ILE 9 -0.0033
ILE 9ALA 10 -0.0017
ALA 10GLU 11 0.0017
GLU 11GLU 11 -0.0032
GLU 11PHE 12 0.0001
PHE 12PHE 12 0.0113
PHE 12LYS 13 -0.0050
LYS 13LYS 13 -0.0067
LYS 13GLU 14 0.0007
GLU 14ALA 15 0.0050
ALA 15PHE 16 -0.0006
PHE 16ALA 17 0.0073
ALA 17LEU 18 -0.0104
LEU 18PHE 19 -0.0036
PHE 19ASP 20 0.0055
ASP 20LYS 21 -0.0008
LYS 21ASP 22 -0.0024
ASP 22GLY 23 0.0006
GLY 23ASP 24 0.0016
ASP 24GLY 25 -0.0056
GLY 25THR 26 0.0003
THR 26ILE 27 0.0003
ILE 27THR 28 -0.0020
THR 28THR 29 -0.0028
THR 29LYS 30 0.0026
LYS 30GLU 31 -0.0000
GLU 31LEU 32 -0.0014
LEU 32GLY 33 -0.0009
GLY 33THR 34 0.0000
THR 34VAL 35 0.0022
VAL 35MET 36 -0.0039
MET 36MET 36 0.0023
MET 36ARG 37 0.0016
ARG 37SER 38 0.0005
SER 38LEU 39 -0.0003
LEU 39LEU 39 -0.0054
LEU 39GLY 40 0.0005
GLY 40GLN 41 0.0011
GLN 41ASN 42 0.0003
ASN 42PRO 43 0.0017
PRO 43PRO 43 -0.0025
PRO 43THR 44 -0.0015
THR 44GLU 45 -0.0024
GLU 45ALA 46 -0.0001
ALA 46GLU 47 -0.0002
GLU 47LEU 48 -0.0031
LEU 48GLN 49 -0.0018
GLN 49ASP 50 -0.0005
ASP 50MET 51 0.0008
MET 51ILE 52 -0.0016
ILE 52ILE 52 0.0036
ILE 52ASN 53 0.0002
ASN 53GLU 54 0.0014
GLU 54VAL 55 0.0026
VAL 55VAL 55 -0.0014
VAL 55ASP 56 -0.0010
ASP 56ALA 57 0.0009
ALA 57ASP 58 -0.0008
ASP 58GLY 59 0.0011
GLY 59ASN 60 0.0005
ASN 60GLY 61 -0.0025
GLY 61THR 62 -0.0008
THR 62ILE 63 0.0019
ILE 63ASP 64 -0.0008
ASP 64PHE 65 0.0008
PHE 65PRO 66 -0.0073
PRO 66GLU 67 0.0101
GLU 67PHE 68 -0.0016
PHE 68PHE 68 0.0100
PHE 68LEU 69 -0.0001
LEU 69SER 70 -0.0086
SER 70SER 70 0.0050
SER 70LEU 71 0.0031
LEU 71LEU 71 -0.0003
LEU 71MET 72 -0.0068
MET 72MET 72 0.0001
MET 72ALA 73 -0.0016
ALA 73ALA 73 0.0006
ALA 73ARG 74 -0.0208
ARG 74ARG 74 -0.0003
ARG 74LYS 75 -0.0178
LYS 75MET 76 -0.0162
MET 76MET 76 -0.0018
MET 76LYS 77 0.0020
LYS 77GLU 78 -0.0172
GLU 78GLU 78 0.0029
GLU 78GLN 79 -0.0130
GLN 79ASP 80 -0.0079
ASP 80ASP 80 -0.0118
ASP 80SER 81 -0.0242
SER 81SER 81 -0.0005
SER 81GLU 82 -0.0215
GLU 82GLU 82 0.0006
GLU 82GLU 83 -0.0265
GLU 83GLU 84 -0.0104
GLU 84LEU 85 -0.0197
LEU 85LEU 85 0.0037
LEU 85ILE 86 -0.0064
ILE 86GLU 87 0.0006
GLU 87GLU 87 0.0019
GLU 87ALA 88 -0.0148
ALA 88PHE 89 -0.0004
PHE 89LYS 90 0.0044
LYS 90LYS 90 -0.0007
LYS 90VAL 91 -0.0061
VAL 91VAL 91 0.0012
VAL 91PHE 92 -0.0016
PHE 92PHE 92 0.0011
PHE 92ASP 93 0.0013
ASP 93ARG 94 -0.0012
ARG 94ASP 95 -0.0019
ASP 95GLY 96 0.0031
GLY 96ASN 97 0.0071
ASN 97GLY 98 -0.0040
GLY 98LEU 99 0.0029
LEU 99ILE 100 0.0000
ILE 100ILE 100 0.0003
ILE 100SER 101 0.0003
SER 101ALA 102 0.0039
ALA 102ALA 103 -0.0009
ALA 103GLU 104 0.0016
GLU 104LEU 105 -0.0007
LEU 105ARG 106 -0.0008
ARG 106HIS 107 -0.0008
HIS 107HIS 107 -0.0003
HIS 107VAL 108 -0.0016
VAL 108MET 109 -0.0054
MET 109THR 110 0.0012
THR 110ASN 111 -0.0006
ASN 111ASN 111 0.0004
ASN 111LEU 112 -0.0006
LEU 112GLY 113 0.0009
GLY 113GLU 114 -0.0002
GLU 114LYS 115 -0.0001
LYS 115LYS 115 -0.0052
LYS 115LEU 116 0.0008
LEU 116LEU 116 -0.0005
LEU 116THR 117 -0.0019
THR 117ASP 118 -0.0001
ASP 118ASP 119 0.0009
ASP 119ASP 119 0.0019
ASP 119GLU 120 -0.0007
GLU 120VAL 121 -0.0006
VAL 121ASP 122 -0.0010
ASP 122GLU 123 -0.0006
GLU 123MET 124 -0.0017
MET 124ILE 125 0.0017
ILE 125ILE 125 -0.0031
ILE 125ARG 126 -0.0009
ARG 126GLU 127 -0.0021
GLU 127ALA 128 0.0045
ALA 128ASP 129 -0.0052
ASP 129ILE 130 0.0011
ILE 130ASP 131 -0.0021
ASP 131GLY 132 0.0014
GLY 132ASP 133 0.0019
ASP 133GLY 134 0.0001
GLY 134HIS 135 0.0029
HIS 135ILE 136 0.0004
ILE 136ILE 136 -0.0103
ILE 136ASN 137 0.0034
ASN 137TYR 138 0.0129
TYR 138TYR 138 -0.0012
TYR 138GLU 139 0.0005
GLU 139GLU 140 0.0055
GLU 140PHE 141 -0.0075
PHE 141PHE 141 0.0352
PHE 141VAL 142 0.0085
VAL 142ARG 143 0.0049
ARG 143ARG 143 0.0027
ARG 143MET 144 0.0004
MET 144MET 144 0.0044
MET 144MET 145 -0.0032
MET 145VAL 146 0.0028
VAL 146SER 147 -0.0041

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.