This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 2
GLN 3
0.0014
GLN 3
LEU 4
-0.0046
LEU 4
THR 5
-0.0078
THR 5
GLU 6
0.0004
GLU 6
GLU 7
-0.0005
GLU 7
GLN 8
0.0071
GLN 8
ILE 9
0.0034
ILE 9
ILE 9
-0.0010
ILE 9
ALA 10
-0.0032
ALA 10
GLU 11
0.0002
GLU 11
GLU 11
-0.0021
GLU 11
PHE 12
-0.0004
PHE 12
PHE 12
-0.0046
PHE 12
LYS 13
0.0102
LYS 13
LYS 13
-0.0014
LYS 13
GLU 14
-0.0061
GLU 14
ALA 15
0.0038
ALA 15
PHE 16
0.0033
PHE 16
ALA 17
-0.0020
ALA 17
LEU 18
-0.0064
LEU 18
PHE 19
0.0011
PHE 19
ASP 20
-0.0014
ASP 20
LYS 21
-0.0005
LYS 21
ASP 22
-0.0014
ASP 22
GLY 23
0.0022
GLY 23
ASP 24
-0.0013
ASP 24
GLY 25
0.0045
GLY 25
THR 26
0.0076
THR 26
ILE 27
-0.0008
ILE 27
THR 28
0.0023
THR 28
THR 29
0.0077
THR 29
LYS 30
-0.0041
LYS 30
GLU 31
-0.0000
GLU 31
LEU 32
0.0032
LEU 32
GLY 33
-0.0003
GLY 33
THR 34
0.0008
THR 34
VAL 35
-0.0033
VAL 35
MET 36
-0.0046
MET 36
MET 36
0.0007
MET 36
ARG 37
0.0012
ARG 37
SER 38
-0.0006
SER 38
LEU 39
-0.0010
LEU 39
LEU 39
-0.0008
LEU 39
GLY 40
-0.0019
GLY 40
GLN 41
0.0018
GLN 41
ASN 42
-0.0005
ASN 42
PRO 43
0.0017
PRO 43
PRO 43
0.0057
PRO 43
THR 44
-0.0025
THR 44
GLU 45
0.0013
GLU 45
ALA 46
0.0002
ALA 46
GLU 47
0.0015
GLU 47
LEU 48
0.0001
LEU 48
GLN 49
0.0023
GLN 49
ASP 50
-0.0005
ASP 50
MET 51
-0.0026
MET 51
ILE 52
0.0049
ILE 52
ILE 52
-0.0061
ILE 52
ASN 53
0.0004
ASN 53
GLU 54
-0.0087
GLU 54
VAL 55
0.0081
VAL 55
VAL 55
0.0040
VAL 55
ASP 56
-0.0225
ASP 56
ALA 57
0.0074
ALA 57
ASP 58
-0.0025
ASP 58
GLY 59
0.0061
GLY 59
ASN 60
0.0022
ASN 60
GLY 61
0.0048
GLY 61
THR 62
0.0074
THR 62
ILE 63
-0.0023
ILE 63
ASP 64
0.0044
ASP 64
PHE 65
0.0367
PHE 65
PRO 66
-0.0159
PRO 66
GLU 67
0.0078
GLU 67
PHE 68
0.0096
PHE 68
PHE 68
0.0096
PHE 68
LEU 69
0.0081
LEU 69
SER 70
-0.0410
SER 70
SER 70
0.0048
SER 70
LEU 71
0.0053
LEU 71
LEU 71
0.0019
LEU 71
MET 72
0.0049
MET 72
MET 72
0.0013
MET 72
ALA 73
-0.0207
ALA 73
ALA 73
-0.0007
ALA 73
ARG 74
-0.0366
ARG 74
ARG 74
0.0003
ARG 74
LYS 75
0.0423
LYS 75
MET 76
-0.0126
MET 76
MET 76
0.0002
MET 76
LYS 77
-0.0237
LYS 77
GLU 78
0.0347
GLU 78
GLU 78
0.0052
GLU 78
GLN 79
0.0122
GLN 79
ASP 80
-0.0565
ASP 80
ASP 80
-0.0134
ASP 80
SER 81
-0.0050
SER 81
SER 81
0.0032
SER 81
GLU 82
0.0449
GLU 82
GLU 82
-0.0041
GLU 82
GLU 83
-0.0308
GLU 83
GLU 84
-0.0542
GLU 84
LEU 85
0.0279
LEU 85
LEU 85
0.0026
LEU 85
ILE 86
-0.0086
ILE 86
GLU 87
-0.0177
GLU 87
GLU 87
0.0002
GLU 87
ALA 88
0.0057
ALA 88
PHE 89
0.0092
PHE 89
LYS 90
-0.0031
LYS 90
LYS 90
-0.0002
LYS 90
VAL 91
-0.0009
VAL 91
VAL 91
-0.0002
VAL 91
PHE 92
0.0040
PHE 92
PHE 92
-0.0003
PHE 92
ASP 93
-0.0047
ASP 93
ARG 94
-0.0012
ARG 94
ASP 95
0.0010
ASP 95
GLY 96
0.0059
GLY 96
ASN 97
0.0076
ASN 97
GLY 98
-0.0032
GLY 98
LEU 99
0.0012
LEU 99
ILE 100
0.0000
ILE 100
ILE 100
-0.0047
ILE 100
SER 101
-0.0020
SER 101
ALA 102
0.0055
ALA 102
ALA 103
-0.0026
ALA 103
GLU 104
0.0096
GLU 104
LEU 105
0.0014
LEU 105
ARG 106
0.0006
ARG 106
HIS 107
0.0015
HIS 107
HIS 107
0.0033
HIS 107
VAL 108
0.0038
VAL 108
MET 109
0.0026
MET 109
THR 110
0.0004
THR 110
ASN 111
0.0008
ASN 111
ASN 111
-0.0029
ASN 111
LEU 112
-0.0004
LEU 112
GLY 113
-0.0012
GLY 113
GLU 114
0.0001
GLU 114
LYS 115
-0.0005
LYS 115
LYS 115
0.0007
LYS 115
LEU 116
-0.0004
LEU 116
LEU 116
-0.0018
LEU 116
THR 117
-0.0006
THR 117
ASP 118
-0.0003
ASP 118
ASP 119
0.0016
ASP 119
ASP 119
0.0072
ASP 119
GLU 120
0.0007
GLU 120
VAL 121
0.0023
VAL 121
ASP 122
0.0012
ASP 122
GLU 123
0.0012
GLU 123
MET 124
-0.0010
MET 124
ILE 125
0.0027
ILE 125
ILE 125
-0.0010
ILE 125
ARG 126
0.0020
ARG 126
GLU 127
-0.0045
GLU 127
ALA 128
-0.0017
ALA 128
ASP 129
-0.0052
ASP 129
ILE 130
0.0018
ILE 130
ASP 131
-0.0013
ASP 131
GLY 132
0.0002
GLY 132
ASP 133
0.0013
ASP 133
GLY 134
0.0013
GLY 134
HIS 135
0.0007
HIS 135
ILE 136
-0.0045
ILE 136
ILE 136
0.0017
ILE 136
ASN 137
-0.0022
ASN 137
TYR 138
-0.0117
TYR 138
TYR 138
-0.0031
TYR 138
GLU 139
0.0017
GLU 139
GLU 140
-0.0008
GLU 140
PHE 141
0.0024
PHE 141
PHE 141
0.0856
PHE 141
VAL 142
-0.0054
VAL 142
ARG 143
-0.0044
ARG 143
ARG 143
0.0001
ARG 143
MET 144
-0.0017
MET 144
MET 144
0.0008
MET 144
MET 145
-0.0089
MET 145
VAL 146
0.0078
VAL 146
SER 147
-0.0134
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.