This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PHE 1
ILE 2
0.1963
ILE 2
PRO 3
-0.2065
PRO 3
LEU 4
0.3189
LEU 4
VAL 5
-0.1026
VAL 5
ALA 6
-0.5805
ALA 6
GLY 7
1.2494
GLY 7
LEU 8
-0.6947
LEU 8
PHE 9
-0.8614
PHE 9
ALA 10
0.4280
ALA 10
LEU 11
-0.1879
LEU 11
LEU 12
-0.6506
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.