This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PHE 1
ILE 2
-0.0451
ILE 2
PRO 3
0.0532
PRO 3
LEU 4
-0.1696
LEU 4
VAL 5
-0.1810
VAL 5
ALA 6
0.0053
ALA 6
GLY 7
0.1671
GLY 7
LEU 8
-0.9723
LEU 8
PHE 9
0.2312
PHE 9
ALA 10
-0.1650
ALA 10
LEU 11
-0.1122
LEU 11
LEU 12
0.0248
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.