This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 3
GLU 4
-0.0310
GLU 4
GLU 4
0.0036
GLU 4
LEU 5
0.0880
LEU 5
ARG 6
0.0567
ARG 6
ARG 6
-0.0048
ARG 6
CYS 7
-0.1126
CYS 7
GLN 8
0.0000
GLN 8
CYS 9
0.2147
CYS 9
ILE 10
0.0691
ILE 10
LYS 11
-0.1175
LYS 11
LYS 11
-0.0037
LYS 11
THR 12
-0.2395
THR 12
TYR 13
-0.0552
TYR 13
SER 14
0.0281
SER 14
SER 14
-0.0065
SER 14
LYS 15
0.0447
LYS 15
PRO 16
0.0048
PRO 16
PHE 17
-0.0246
PHE 17
HIS 18
0.2479
HIS 18
PRO 19
0.0522
PRO 19
LYS 20
-0.0598
LYS 20
PHE 21
0.1124
PHE 21
ILE 22
-0.0828
ILE 22
LYS 23
-0.1135
LYS 23
LYS 23
-0.0137
LYS 23
GLU 24
-0.0519
GLU 24
GLU 24
-0.0190
GLU 24
LEU 25
-0.0172
LEU 25
LEU 25
0.0004
LEU 25
ARG 26
-0.0210
ARG 26
ARG 26
0.0093
ARG 26
ARG 26
0.0271
ARG 26
VAL 27
0.0104
VAL 27
ILE 28
0.0178
ILE 28
GLU 29
-0.0663
GLU 29
SER 30
0.0374
SER 30
GLY 31
-0.0123
GLY 31
PRO 32
0.1763
PRO 32
HIS 33
-0.0051
HIS 33
CYS 34
-0.1598
CYS 34
ALA 35
0.1243
ALA 35
ASN 36
-0.1894
ASN 36
THR 37
0.0156
THR 37
GLU 38
-0.0268
GLU 38
ILE 39
-0.0260
ILE 39
ILE 40
0.0475
ILE 40
VAL 41
0.0341
VAL 41
LYS 42
-0.0579
LYS 42
LYS 42
-0.0270
LYS 42
LEU 43
-0.0651
LEU 43
SER 44
0.0598
SER 44
ASP 45
-0.0361
ASP 45
GLY 46
-0.0045
GLY 46
ARG 47
0.0261
ARG 47
GLU 48
0.0464
GLU 48
LEU 49
0.0811
LEU 49
LEU 49
-0.0019
LEU 49
CYS 50
-0.0785
CYS 50
LEU 51
0.0755
LEU 51
ASP 52
0.0803
ASP 52
PRO 53
-0.0145
PRO 53
PRO 53
0.0043
PRO 53
LYS 54
0.0589
LYS 54
GLU 55
0.1318
GLU 55
ASN 56
-0.0859
ASN 56
ASN 56
-0.0330
ASN 56
TRP 57
0.0087
TRP 57
VAL 58
0.0409
VAL 58
GLN 59
-0.1116
GLN 59
ARG 60
-0.0595
ARG 60
VAL 61
0.0538
VAL 61
VAL 61
0.0597
VAL 61
VAL 62
0.0241
VAL 62
GLU 63
-0.0887
GLU 63
GLU 63
0.0027
GLU 63
LYS 64
0.0425
LYS 64
LYS 64
-0.0282
LYS 64
PHE 65
0.0929
PHE 65
LEU 66
0.0049
LEU 66
LEU 66
0.0149
LEU 66
LYS 67
0.0941
LYS 67
LYS 67
-0.0027
LYS 67
ARG 68
0.1725
ARG 68
ALA 69
-0.1960
ALA 69
GLU 70
0.2490
GLU 70
ASN 71
0.1106
ASN 71
SER 72
-0.3621
SER 72
SER 72
0.0002
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.