This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 3
GLU 4
0.0370
GLU 4
GLU 4
-0.0019
GLU 4
LEU 5
-0.0107
LEU 5
ARG 6
-0.0659
ARG 6
ARG 6
-0.0049
ARG 6
CYS 7
0.0868
CYS 7
GLN 8
0.1555
GLN 8
CYS 9
-0.1020
CYS 9
ILE 10
0.0185
ILE 10
LYS 11
-0.0753
LYS 11
LYS 11
0.0268
LYS 11
THR 12
-0.1207
THR 12
TYR 13
0.0891
TYR 13
SER 14
-0.0532
SER 14
SER 14
-0.0008
SER 14
LYS 15
0.0696
LYS 15
PRO 16
0.0250
PRO 16
PHE 17
-0.0117
PHE 17
HIS 18
0.1884
HIS 18
PRO 19
0.0240
PRO 19
LYS 20
-0.0372
LYS 20
PHE 21
0.0667
PHE 21
ILE 22
-0.0705
ILE 22
LYS 23
-0.0226
LYS 23
LYS 23
-0.0086
LYS 23
GLU 24
-0.0570
GLU 24
GLU 24
-0.0224
GLU 24
LEU 25
-0.0268
LEU 25
LEU 25
0.0003
LEU 25
ARG 26
-0.1001
ARG 26
ARG 26
-0.0002
ARG 26
ARG 26
-0.0072
ARG 26
VAL 27
-0.0173
VAL 27
ILE 28
-0.4187
ILE 28
GLU 29
0.0200
GLU 29
SER 30
-0.1812
SER 30
GLY 31
0.0477
GLY 31
PRO 32
-0.2237
PRO 32
HIS 33
0.0344
HIS 33
CYS 34
0.1310
CYS 34
ALA 35
-0.0755
ALA 35
ASN 36
0.1204
ASN 36
THR 37
-0.1363
THR 37
GLU 38
0.0999
GLU 38
ILE 39
-0.0488
ILE 39
ILE 40
0.0527
ILE 40
VAL 41
0.1096
VAL 41
LYS 42
-0.0001
LYS 42
LYS 42
0.0000
LYS 42
LEU 43
-0.0301
LEU 43
SER 44
0.0347
SER 44
ASP 45
-0.0223
ASP 45
GLY 46
0.0281
GLY 46
ARG 47
-0.0126
ARG 47
GLU 48
0.0832
GLU 48
LEU 49
-0.0240
LEU 49
LEU 49
0.0020
LEU 49
CYS 50
0.1239
CYS 50
LEU 51
0.0065
LEU 51
ASP 52
0.0071
ASP 52
PRO 53
-0.0115
PRO 53
PRO 53
0.0122
PRO 53
LYS 54
0.0271
LYS 54
GLU 55
-0.0020
GLU 55
ASN 56
-0.0042
ASN 56
ASN 56
0.0141
ASN 56
TRP 57
-0.0313
TRP 57
VAL 58
0.0056
VAL 58
GLN 59
-0.0099
GLN 59
ARG 60
-0.0875
ARG 60
VAL 61
-0.0036
VAL 61
VAL 61
0.0082
VAL 61
VAL 62
-0.0344
VAL 62
GLU 63
-0.0335
GLU 63
GLU 63
-0.0063
GLU 63
LYS 64
-0.0110
LYS 64
LYS 64
0.0135
LYS 64
PHE 65
-0.0090
PHE 65
LEU 66
0.0777
LEU 66
LEU 66
0.0168
LEU 66
LYS 67
-0.0599
LYS 67
LYS 67
-0.0229
LYS 67
ARG 68
0.0488
ARG 68
ALA 69
-0.0320
ALA 69
GLU 70
0.1133
GLU 70
ASN 71
-0.1070
ASN 71
SER 72
0.0197
SER 72
SER 72
-0.0000
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.