CNRS Nantes University US2B US2B
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***  CYTOKINE 20-DEC-14 4XDX  ***

CA strain for 2402020545381255676

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 3GLU 4 0.0370
GLU 4GLU 4 -0.0019
GLU 4LEU 5 -0.0107
LEU 5ARG 6 -0.0659
ARG 6ARG 6 -0.0049
ARG 6CYS 7 0.0868
CYS 7GLN 8 0.1555
GLN 8CYS 9 -0.1020
CYS 9ILE 10 0.0185
ILE 10LYS 11 -0.0753
LYS 11LYS 11 0.0268
LYS 11THR 12 -0.1207
THR 12TYR 13 0.0891
TYR 13SER 14 -0.0532
SER 14SER 14 -0.0008
SER 14LYS 15 0.0696
LYS 15PRO 16 0.0250
PRO 16PHE 17 -0.0117
PHE 17HIS 18 0.1884
HIS 18PRO 19 0.0240
PRO 19LYS 20 -0.0372
LYS 20PHE 21 0.0667
PHE 21ILE 22 -0.0705
ILE 22LYS 23 -0.0226
LYS 23LYS 23 -0.0086
LYS 23GLU 24 -0.0570
GLU 24GLU 24 -0.0224
GLU 24LEU 25 -0.0268
LEU 25LEU 25 0.0003
LEU 25ARG 26 -0.1001
ARG 26ARG 26 -0.0002
ARG 26ARG 26 -0.0072
ARG 26VAL 27 -0.0173
VAL 27ILE 28 -0.4187
ILE 28GLU 29 0.0200
GLU 29SER 30 -0.1812
SER 30GLY 31 0.0477
GLY 31PRO 32 -0.2237
PRO 32HIS 33 0.0344
HIS 33CYS 34 0.1310
CYS 34ALA 35 -0.0755
ALA 35ASN 36 0.1204
ASN 36THR 37 -0.1363
THR 37GLU 38 0.0999
GLU 38ILE 39 -0.0488
ILE 39ILE 40 0.0527
ILE 40VAL 41 0.1096
VAL 41LYS 42 -0.0001
LYS 42LYS 42 0.0000
LYS 42LEU 43 -0.0301
LEU 43SER 44 0.0347
SER 44ASP 45 -0.0223
ASP 45GLY 46 0.0281
GLY 46ARG 47 -0.0126
ARG 47GLU 48 0.0832
GLU 48LEU 49 -0.0240
LEU 49LEU 49 0.0020
LEU 49CYS 50 0.1239
CYS 50LEU 51 0.0065
LEU 51ASP 52 0.0071
ASP 52PRO 53 -0.0115
PRO 53PRO 53 0.0122
PRO 53LYS 54 0.0271
LYS 54GLU 55 -0.0020
GLU 55ASN 56 -0.0042
ASN 56ASN 56 0.0141
ASN 56TRP 57 -0.0313
TRP 57VAL 58 0.0056
VAL 58GLN 59 -0.0099
GLN 59ARG 60 -0.0875
ARG 60VAL 61 -0.0036
VAL 61VAL 61 0.0082
VAL 61VAL 62 -0.0344
VAL 62GLU 63 -0.0335
GLU 63GLU 63 -0.0063
GLU 63LYS 64 -0.0110
LYS 64LYS 64 0.0135
LYS 64PHE 65 -0.0090
PHE 65LEU 66 0.0777
LEU 66LEU 66 0.0168
LEU 66LYS 67 -0.0599
LYS 67LYS 67 -0.0229
LYS 67ARG 68 0.0488
ARG 68ALA 69 -0.0320
ALA 69GLU 70 0.1133
GLU 70ASN 71 -0.1070
ASN 71SER 72 0.0197
SER 72SER 72 -0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.