This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 3
GLU 4
-0.0638
GLU 4
GLU 4
0.0322
GLU 4
LEU 5
-0.0801
LEU 5
ARG 6
-0.0318
ARG 6
ARG 6
-0.0148
ARG 6
CYS 7
-0.1316
CYS 7
GLN 8
0.1992
GLN 8
CYS 9
-0.4037
CYS 9
ILE 10
0.2368
ILE 10
LYS 11
-0.1742
LYS 11
LYS 11
-0.0115
LYS 11
THR 12
-0.1342
THR 12
TYR 13
-0.0518
TYR 13
SER 14
0.0481
SER 14
SER 14
-0.0007
SER 14
LYS 15
-0.0523
LYS 15
PRO 16
-0.0325
PRO 16
PHE 17
0.0247
PHE 17
HIS 18
-0.1726
HIS 18
PRO 19
-0.0082
PRO 19
LYS 20
0.0244
LYS 20
PHE 21
-0.0614
PHE 21
ILE 22
0.0457
ILE 22
LYS 23
0.0100
LYS 23
LYS 23
0.0170
LYS 23
GLU 24
0.0428
GLU 24
GLU 24
0.0000
GLU 24
LEU 25
-0.0443
LEU 25
LEU 25
-0.0020
LEU 25
ARG 26
0.1418
ARG 26
ARG 26
0.0021
ARG 26
ARG 26
-0.0018
ARG 26
VAL 27
-0.1453
VAL 27
ILE 28
0.3090
ILE 28
GLU 29
-0.2195
GLU 29
SER 30
-0.1336
SER 30
GLY 31
0.1334
GLY 31
PRO 32
0.0062
PRO 32
HIS 33
-0.0261
HIS 33
CYS 34
0.0483
CYS 34
ALA 35
-0.0243
ALA 35
ASN 36
0.1244
ASN 36
THR 37
-0.0864
THR 37
GLU 38
0.0170
GLU 38
ILE 39
0.0511
ILE 39
ILE 40
-0.0276
ILE 40
VAL 41
-0.0833
VAL 41
LYS 42
0.0158
LYS 42
LYS 42
0.0005
LYS 42
LEU 43
-0.0489
LEU 43
SER 44
0.0239
SER 44
ASP 45
0.0085
ASP 45
GLY 46
-0.0860
GLY 46
ARG 47
0.0603
ARG 47
GLU 48
-0.1045
GLU 48
LEU 49
0.0539
LEU 49
LEU 49
-0.0010
LEU 49
CYS 50
-0.0003
CYS 50
LEU 51
-0.0989
LEU 51
ASP 52
0.0220
ASP 52
PRO 53
0.0673
PRO 53
PRO 53
-0.0288
PRO 53
LYS 54
-0.0128
LYS 54
GLU 55
0.0993
GLU 55
ASN 56
-0.0346
ASN 56
ASN 56
-0.0124
ASN 56
TRP 57
0.0060
TRP 57
VAL 58
0.0236
VAL 58
GLN 59
-0.0565
GLN 59
ARG 60
0.0351
ARG 60
VAL 61
0.0439
VAL 61
VAL 61
0.0426
VAL 61
VAL 62
0.0522
VAL 62
GLU 63
0.0068
GLU 63
GLU 63
0.0049
GLU 63
LYS 64
0.0325
LYS 64
LYS 64
0.0681
LYS 64
PHE 65
0.1004
PHE 65
LEU 66
-0.1056
LEU 66
LEU 66
-0.0199
LEU 66
LYS 67
0.1178
LYS 67
LYS 67
-0.0019
LYS 67
ARG 68
-0.0070
ARG 68
ALA 69
-0.0126
ALA 69
GLU 70
-0.0003
GLU 70
ASN 71
0.1523
ASN 71
SER 72
-0.1812
SER 72
SER 72
-0.0003
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.