This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 3
GLU 4
0.2044
GLU 4
GLU 4
-0.0061
GLU 4
LEU 5
-0.0203
LEU 5
ARG 6
0.0636
ARG 6
ARG 6
0.0072
ARG 6
CYS 7
0.1289
CYS 7
GLN 8
-0.1898
GLN 8
CYS 9
0.1115
CYS 9
ILE 10
0.0369
ILE 10
LYS 11
0.0155
LYS 11
LYS 11
0.0008
LYS 11
THR 12
-0.0559
THR 12
TYR 13
0.0067
TYR 13
SER 14
0.0213
SER 14
SER 14
-0.0205
SER 14
LYS 15
0.0219
LYS 15
PRO 16
-0.0048
PRO 16
PHE 17
0.0406
PHE 17
HIS 18
0.1102
HIS 18
PRO 19
0.0243
PRO 19
LYS 20
0.0027
LYS 20
PHE 21
0.0357
PHE 21
ILE 22
-0.0249
ILE 22
LYS 23
-0.0323
LYS 23
LYS 23
0.0086
LYS 23
GLU 24
-0.0720
GLU 24
GLU 24
-0.0170
GLU 24
LEU 25
0.0939
LEU 25
LEU 25
-0.0006
LEU 25
ARG 26
-0.0442
ARG 26
ARG 26
-0.0014
ARG 26
ARG 26
0.0036
ARG 26
VAL 27
-0.0226
VAL 27
ILE 28
0.0740
ILE 28
GLU 29
-0.0647
GLU 29
SER 30
-0.0304
SER 30
GLY 31
0.1220
GLY 31
PRO 32
0.0419
PRO 32
HIS 33
-0.1552
HIS 33
CYS 34
0.3047
CYS 34
ALA 35
-0.1280
ALA 35
ASN 36
0.2959
ASN 36
THR 37
-0.1440
THR 37
GLU 38
-0.1054
GLU 38
ILE 39
0.1240
ILE 39
ILE 40
-0.0146
ILE 40
VAL 41
-0.1019
VAL 41
LYS 42
0.0262
LYS 42
LYS 42
0.0005
LYS 42
LEU 43
-0.0394
LEU 43
SER 44
-0.0083
SER 44
ASP 45
0.0219
ASP 45
GLY 46
-0.0886
GLY 46
ARG 47
0.0498
ARG 47
GLU 48
-0.1144
GLU 48
LEU 49
0.0557
LEU 49
LEU 49
-0.0031
LEU 49
CYS 50
-0.1000
CYS 50
LEU 51
0.0034
LEU 51
ASP 52
-0.0010
ASP 52
PRO 53
-0.0800
PRO 53
PRO 53
0.0064
PRO 53
LYS 54
-0.0313
LYS 54
GLU 55
0.2677
GLU 55
ASN 56
0.0545
ASN 56
ASN 56
-0.0047
ASN 56
TRP 57
0.0066
TRP 57
VAL 58
0.0412
VAL 58
GLN 59
-0.0797
GLN 59
ARG 60
0.2388
ARG 60
VAL 61
-0.0438
VAL 61
VAL 61
-0.0251
VAL 61
VAL 62
0.0092
VAL 62
GLU 63
0.1027
GLU 63
GLU 63
0.0051
GLU 63
LYS 64
-0.0072
LYS 64
LYS 64
-0.0269
LYS 64
PHE 65
-0.1090
PHE 65
LEU 66
0.1242
LEU 66
LEU 66
0.0300
LEU 66
LYS 67
-0.0868
LYS 67
LYS 67
-0.0000
LYS 67
ARG 68
-0.0303
ARG 68
ALA 69
-0.0007
ALA 69
GLU 70
0.1685
GLU 70
ASN 71
-0.1855
ASN 71
SER 72
0.1506
SER 72
SER 72
0.0001
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.