This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
-0.1741
GLN 2
ILE 3
-0.0472
ILE 3
THR 4
0.0790
THR 4
LEU 5
0.0727
LEU 5
TRP 6
-0.0432
TRP 6
GLN 7
-0.0004
GLN 7
ARG 8
-0.0065
ARG 8
PRO 9
0.0018
PRO 9
LEU 10
-0.0490
LEU 10
VAL 11
0.0296
VAL 11
THR 12
-0.0283
THR 12
ILE 13
0.0028
ILE 13
LYS 14
-0.0033
LYS 14
ILE 15
-0.0061
ILE 15
GLY 16
-0.0013
GLY 16
GLY 17
0.0066
GLY 17
GLN 18
-0.0045
GLN 18
LEU 19
-0.0059
LEU 19
LYS 20
-0.0030
LYS 20
GLU 21
-0.0297
GLU 21
ALA 22
0.0193
ALA 22
LEU 23
0.0201
LEU 23
LEU 24
-0.0101
LEU 24
ASP 25
-0.0056
ASP 25
THR 26
0.0317
THR 26
GLY 27
0.0209
GLY 27
ALA 28
0.0444
ALA 28
ASP 29
-0.0060
ASP 29
ASP 30
0.0203
ASP 30
THR 31
-0.0030
THR 31
VAL 32
0.0057
VAL 32
LEU 33
-0.0112
LEU 33
GLU 34
0.0083
GLU 34
GLU 35
0.0051
GLU 35
MET 36
-0.0164
MET 36
SER 37
-0.0112
SER 37
LEU 38
-0.0021
LEU 38
PRO 39
-0.0092
PRO 39
GLY 40
-0.0031
GLY 40
ARG 41
0.0087
ARG 41
TRP 42
-0.0041
TRP 42
LYS 43
0.0043
LYS 43
PRO 44
0.0321
PRO 44
LYS 45
-0.0010
LYS 45
MET 46
0.1488
MET 46
ILE 47
-0.1304
ILE 47
GLY 48
-0.0604
GLY 48
GLY 49
-0.0099
GLY 49
ILE 50
-0.0092
ILE 50
GLY 51
0.0070
GLY 51
GLY 52
0.0789
GLY 52
PHE 53
0.3305
PHE 53
ILE 54
-0.0756
ILE 54
LYS 55
-0.0856
LYS 55
VAL 56
0.0104
VAL 56
ARG 57
-0.0294
ARG 57
GLN 58
0.0070
GLN 58
TYR 59
0.0106
TYR 59
ASP 60
-0.0078
ASP 60
GLN 61
0.0120
GLN 61
ILE 62
-0.0119
ILE 62
LEU 63
0.0037
LEU 63
ILE 64
-0.0037
ILE 64
GLU 65
-0.0103
GLU 65
ILE 66
0.0037
ILE 66
CYS 67
-0.0329
CYS 67
GLY 68
-0.0215
GLY 68
HIS 69
-0.0006
HIS 69
LYS 70
0.0046
LYS 70
ALA 71
-0.0054
ALA 71
ILE 72
0.0126
ILE 72
GLY 73
-0.0042
GLY 73
THR 74
-0.0087
THR 74
VAL 75
-0.0020
VAL 75
LEU 76
-0.0252
LEU 76
VAL 77
0.0126
VAL 77
GLY 78
-0.0184
GLY 78
PRO 79
0.0074
PRO 79
THR 80
0.0265
THR 80
PRO 81
-0.0219
PRO 81
VAL 82
-0.0190
VAL 82
ASN 83
0.0001
ASN 83
ILE 84
0.0157
ILE 84
ILE 85
0.0040
ILE 85
GLY 86
-0.0085
GLY 86
ARG 87
0.0059
ARG 87
ASN 88
0.0093
ASN 88
LEU 89
-0.0171
LEU 89
LEU 90
0.0310
LEU 90
THR 91
-0.0148
THR 91
GLN 92
0.0153
GLN 92
ILE 93
0.0014
ILE 93
GLY 94
0.0525
GLY 94
CYS 95
-0.0431
CYS 95
THR 96
0.0276
THR 96
LEU 97
0.0666
LEU 97
ASN 98
-0.0168
ASN 98
PHE 99
-0.0005
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.