This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
GLN 2
0.0048
GLN 2
ILE 3
-0.0830
ILE 3
THR 4
0.0579
THR 4
LEU 5
0.0191
LEU 5
TRP 6
0.1137
TRP 6
GLN 7
-0.0863
GLN 7
ARG 8
-0.0730
ARG 8
PRO 9
-0.0080
PRO 9
LEU 10
-0.0676
LEU 10
VAL 11
0.0667
VAL 11
THR 12
-0.0438
THR 12
ILE 13
0.0109
ILE 13
LYS 14
0.0048
LYS 14
ILE 15
-0.0157
ILE 15
GLY 16
-0.0088
GLY 16
GLY 17
-0.0232
GLY 17
GLN 18
0.0040
GLN 18
LEU 19
-0.0225
LEU 19
LYS 20
0.0169
LYS 20
GLU 21
-0.0945
GLU 21
ALA 22
0.0373
ALA 22
LEU 23
0.0423
LEU 23
LEU 24
0.0294
LEU 24
ASP 25
-0.0971
ASP 25
THR 26
0.1433
THR 26
GLY 27
0.1701
GLY 27
ALA 28
0.1365
ALA 28
ASP 29
-0.0460
ASP 29
ASP 30
0.0807
ASP 30
THR 31
0.0009
THR 31
VAL 32
-0.0302
VAL 32
LEU 33
0.0275
LEU 33
GLU 34
0.0187
GLU 34
GLU 35
-0.0485
GLU 35
MET 36
0.0135
MET 36
SER 37
0.0064
SER 37
LEU 38
0.0132
LEU 38
PRO 39
-0.0083
PRO 39
GLY 40
-0.0171
GLY 40
ARG 41
-0.0136
ARG 41
TRP 42
-0.0064
TRP 42
LYS 43
-0.0240
LYS 43
PRO 44
0.0317
PRO 44
LYS 45
0.0092
LYS 45
MET 46
0.0159
MET 46
ILE 47
-0.0294
ILE 47
GLY 48
-0.3096
GLY 48
GLY 49
-0.0970
GLY 49
ILE 50
-0.0860
ILE 50
GLY 51
0.0384
GLY 51
GLY 52
0.0524
GLY 52
PHE 53
0.1692
PHE 53
ILE 54
-0.0035
ILE 54
LYS 55
0.1710
LYS 55
VAL 56
0.0211
VAL 56
ARG 57
0.0000
ARG 57
GLN 58
-0.0079
GLN 58
TYR 59
-0.0210
TYR 59
ASP 60
-0.0114
ASP 60
GLN 61
-0.0040
GLN 61
ILE 62
0.0034
ILE 62
LEU 63
-0.0117
LEU 63
ILE 64
0.0035
ILE 64
GLU 65
0.0012
GLU 65
ILE 66
-0.0056
ILE 66
CYS 67
-0.0337
CYS 67
GLY 68
0.0285
GLY 68
HIS 69
-0.0714
HIS 69
LYS 70
0.0903
LYS 70
ALA 71
0.0146
ALA 71
ILE 72
0.0214
ILE 72
GLY 73
0.0096
GLY 73
THR 74
-0.0187
THR 74
VAL 75
-0.0187
VAL 75
LEU 76
-0.0567
LEU 76
VAL 77
0.0354
VAL 77
GLY 78
-0.0045
GLY 78
PRO 79
0.0036
PRO 79
THR 80
-0.0360
THR 80
PRO 81
-0.0310
PRO 81
VAL 82
-0.0300
VAL 82
ASN 83
-0.0162
ASN 83
ILE 84
0.0448
ILE 84
ILE 85
-0.0018
ILE 85
GLY 86
-0.0246
GLY 86
ARG 87
-0.0086
ARG 87
ASN 88
0.0427
ASN 88
LEU 89
-0.0242
LEU 89
LEU 90
0.0185
LEU 90
THR 91
-0.0057
THR 91
GLN 92
0.0158
GLN 92
ILE 93
0.0143
ILE 93
GLY 94
-0.0777
GLY 94
CYS 95
0.1102
CYS 95
THR 96
-0.1974
THR 96
LEU 97
-0.0575
LEU 97
ASN 98
0.1554
ASN 98
PHE 99
0.0247
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.