CNRS Nantes University US2B US2B
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CA strain for 2402062318011738460

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 -0.0394
ALA 2SER 3 0.0253
SER 3LYS 4 -0.0588
LYS 4GLU 5 0.0375
GLU 5TYR 6 0.0018
TYR 6GLY 7 0.0097
GLY 7VAL 8 -0.0168
VAL 8THR 9 0.0271
THR 9ILE 10 -0.0409
ILE 10GLY 11 0.0220
GLY 11GLU 12 -0.0301
GLU 12SER 13 0.0044
SER 13ARG 14 0.0108
ARG 14ILE 15 0.0001
ILE 15ILE 16 -0.0137
ILE 16TYR 17 -0.0010
TYR 17PRO 18 0.0252
PRO 18LEU 19 -0.0148
LEU 19ASP 20 0.0012
ASP 20ALA 21 -0.0160
ALA 21ALA 22 0.0024
ALA 22GLY 23 0.0037
GLY 23VAL 24 0.0066
VAL 24MET 25 -0.0078
MET 25VAL 26 -0.0116
VAL 26SER 27 -0.0048
SER 27VAL 28 -0.0212
VAL 28LYS 29 0.0188
LYS 29ASN 30 -0.0456
ASN 30THR 31 -0.0015
THR 31GLN 32 -0.0197
GLN 32ASP 33 0.0036
ASP 33TYR 34 0.0062
TYR 34PRO 35 -0.0286
PRO 35VAL 36 0.0359
VAL 36LEU 37 -0.0628
LEU 37ILE 38 0.0157
ILE 38GLN 39 0.0670
GLN 39SER 40 0.0031
SER 40ARG 41 0.0506
ARG 41ILE 42 -0.0053
ILE 42TYR 43 0.0129

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.