CNRS Nantes University US2B US2B
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CA strain for 2402062318011738460

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 -0.0579
ALA 2SER 3 0.0379
SER 3LYS 4 -0.0640
LYS 4GLU 5 0.0259
GLU 5TYR 6 -0.0205
TYR 6GLY 7 0.0305
GLY 7VAL 8 -0.0272
VAL 8THR 9 0.0759
THR 9ILE 10 -0.0623
ILE 10GLY 11 0.0526
GLY 11GLU 12 0.0627
GLU 12SER 13 -0.0008
SER 13ARG 14 -0.0150
ARG 14ILE 15 -0.0385
ILE 15ILE 16 0.0013
ILE 16TYR 17 0.0603
TYR 17PRO 18 -0.0396
PRO 18LEU 19 0.0333
LEU 19ASP 20 -0.0088
ASP 20ALA 21 0.0223
ALA 21ALA 22 -0.0068
ALA 22GLY 23 -0.0057
GLY 23VAL 24 -0.0100
VAL 24MET 25 0.1333
MET 25VAL 26 -0.0157
VAL 26SER 27 0.0622
SER 27VAL 28 -0.0050
VAL 28LYS 29 0.0046
LYS 29ASN 30 0.0156
ASN 30THR 31 -0.0138
THR 31GLN 32 0.0173
GLN 32ASP 33 0.0026
ASP 33TYR 34 0.0014
TYR 34PRO 35 -0.0053
PRO 35VAL 36 0.0165
VAL 36LEU 37 -0.0251
LEU 37ILE 38 -0.0066
ILE 38GLN 39 0.0168
GLN 39SER 40 -0.0154
SER 40ARG 41 0.0350
ARG 41ILE 42 -0.0167
ILE 42TYR 43 -0.0675

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.