CNRS Nantes University US2B US2B
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CA strain for 2402062318011738460

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 -0.0286
ALA 2SER 3 0.0233
SER 3LYS 4 -0.0388
LYS 4GLU 5 0.0314
GLU 5TYR 6 0.0133
TYR 6GLY 7 -0.0081
GLY 7VAL 8 0.0006
VAL 8THR 9 -0.0228
THR 9ILE 10 -0.0064
ILE 10GLY 11 -0.0043
GLY 11GLU 12 -0.0334
GLU 12SER 13 0.0008
SER 13ARG 14 -0.0002
ARG 14ILE 15 0.0110
ILE 15ILE 16 0.0212
ILE 16TYR 17 -0.0240
TYR 17PRO 18 0.0019
PRO 18LEU 19 -0.0073
LEU 19ASP 20 0.0001
ASP 20ALA 21 0.0022
ALA 21ALA 22 -0.0001
ALA 22GLY 23 0.0001
GLY 23VAL 24 0.0001
VAL 24MET 25 -0.0195
MET 25VAL 26 0.0173
VAL 26SER 27 -0.0133
SER 27VAL 28 0.0226
VAL 28LYS 29 0.0039
LYS 29ASN 30 0.0255
ASN 30THR 31 0.0233
THR 31GLN 32 -0.0324
GLN 32ASP 33 0.0069
ASP 33TYR 34 -0.0024
TYR 34PRO 35 -0.0122
PRO 35VAL 36 -0.0158
VAL 36LEU 37 -0.0300
LEU 37ILE 38 0.0044
ILE 38GLN 39 0.0282
GLN 39SER 40 0.0198
SER 40ARG 41 -0.0058
ARG 41ILE 42 0.0250
ILE 42TYR 43 -0.0077

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.