CNRS Nantes University US2B US2B
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CA strain for 2402062318011738460

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 -0.0120
ALA 2SER 3 0.0292
SER 3LYS 4 -0.1176
LYS 4GLU 5 0.0106
GLU 5TYR 6 0.0074
TYR 6GLY 7 0.0698
GLY 7VAL 8 0.0799
VAL 8THR 9 -0.0173
THR 9ILE 10 0.0702
ILE 10GLY 11 -0.0244
GLY 11GLU 12 0.0141
GLU 12SER 13 -0.0095
SER 13ARG 14 0.0099
ARG 14ILE 15 0.0063
ILE 15ILE 16 -0.0145
ILE 16TYR 17 0.0037
TYR 17PRO 18 0.0128
PRO 18LEU 19 -0.0047
LEU 19ASP 20 0.0012
ASP 20ALA 21 -0.0119
ALA 21ALA 22 0.0044
ALA 22GLY 23 -0.0023
GLY 23VAL 24 0.0004
VAL 24MET 25 -0.0323
MET 25VAL 26 0.0074
VAL 26SER 27 -0.0364
SER 27VAL 28 -0.0144
VAL 28LYS 29 -0.0412
LYS 29ASN 30 -0.0562
ASN 30THR 31 -0.0007
THR 31GLN 32 -0.0083
GLN 32ASP 33 0.0143
ASP 33TYR 34 0.0086
TYR 34PRO 35 0.0231
PRO 35VAL 36 -0.0150
VAL 36LEU 37 0.0572
LEU 37ILE 38 0.0007
ILE 38GLN 39 -0.0359
GLN 39SER 40 -0.0058
SER 40ARG 41 -0.0207
ARG 41ILE 42 -0.0216
ILE 42TYR 43 0.0035

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.