CNRS Nantes University US2B US2B
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CA strain for 2402062318011738460

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PHE 1ALA 2 0.0167
ALA 2SER 3 0.0240
SER 3LYS 4 0.0014
LYS 4GLU 5 -0.0609
GLU 5TYR 6 -0.0026
TYR 6GLY 7 0.0186
GLY 7VAL 8 0.0322
VAL 8THR 9 0.0257
THR 9ILE 10 -0.0242
ILE 10GLY 11 0.0143
GLY 11GLU 12 -0.0296
GLU 12SER 13 -0.0031
SER 13ARG 14 0.0150
ARG 14ILE 15 0.0014
ILE 15ILE 16 0.0243
ILE 16TYR 17 -0.0051
TYR 17PRO 18 -0.0062
PRO 18LEU 19 -0.0023
LEU 19ASP 20 -0.0008
ASP 20ALA 21 -0.0010
ALA 21ALA 22 0.0049
ALA 22GLY 23 0.0052
GLY 23VAL 24 0.0061
VAL 24MET 25 -0.0090
MET 25VAL 26 -0.0081
VAL 26SER 27 0.0249
SER 27VAL 28 -0.0453
VAL 28LYS 29 0.0338
LYS 29ASN 30 -0.0653
ASN 30THR 31 -0.0104
THR 31GLN 32 0.0047
GLN 32ASP 33 0.0034
ASP 33TYR 34 0.0035
TYR 34PRO 35 -0.0110
PRO 35VAL 36 0.0411
VAL 36LEU 37 -0.0786
LEU 37ILE 38 0.0120
ILE 38GLN 39 0.0551
GLN 39SER 40 0.0349
SER 40ARG 41 0.0269
ARG 41ILE 42 0.0568
ILE 42TYR 43 -0.0012

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.