This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PHE 1
ALA 2
0.0167
ALA 2
SER 3
0.0240
SER 3
LYS 4
0.0014
LYS 4
GLU 5
-0.0609
GLU 5
TYR 6
-0.0026
TYR 6
GLY 7
0.0186
GLY 7
VAL 8
0.0322
VAL 8
THR 9
0.0257
THR 9
ILE 10
-0.0242
ILE 10
GLY 11
0.0143
GLY 11
GLU 12
-0.0296
GLU 12
SER 13
-0.0031
SER 13
ARG 14
0.0150
ARG 14
ILE 15
0.0014
ILE 15
ILE 16
0.0243
ILE 16
TYR 17
-0.0051
TYR 17
PRO 18
-0.0062
PRO 18
LEU 19
-0.0023
LEU 19
ASP 20
-0.0008
ASP 20
ALA 21
-0.0010
ALA 21
ALA 22
0.0049
ALA 22
GLY 23
0.0052
GLY 23
VAL 24
0.0061
VAL 24
MET 25
-0.0090
MET 25
VAL 26
-0.0081
VAL 26
SER 27
0.0249
SER 27
VAL 28
-0.0453
VAL 28
LYS 29
0.0338
LYS 29
ASN 30
-0.0653
ASN 30
THR 31
-0.0104
THR 31
GLN 32
0.0047
GLN 32
ASP 33
0.0034
ASP 33
TYR 34
0.0035
TYR 34
PRO 35
-0.0110
PRO 35
VAL 36
0.0411
VAL 36
LEU 37
-0.0786
LEU 37
ILE 38
0.0120
ILE 38
GLN 39
0.0551
GLN 39
SER 40
0.0349
SER 40
ARG 41
0.0269
ARG 41
ILE 42
0.0568
ILE 42
TYR 43
-0.0012
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.