This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PHE 1
ALA 2
-0.0108
ALA 2
SER 3
-0.0443
SER 3
LYS 4
0.1195
LYS 4
GLU 5
0.1063
GLU 5
TYR 6
0.0242
TYR 6
GLY 7
-0.1672
GLY 7
VAL 8
0.0317
VAL 8
THR 9
-0.0072
THR 9
ILE 10
0.1717
ILE 10
GLY 11
-0.0735
GLY 11
GLU 12
0.0482
GLU 12
SER 13
-0.0188
SER 13
ARG 14
0.0012
ARG 14
ILE 15
-0.0082
ILE 15
ILE 16
0.1071
ILE 16
TYR 17
0.0666
TYR 17
PRO 18
0.0093
PRO 18
LEU 19
0.0029
LEU 19
ASP 20
-0.0224
ASP 20
ALA 21
-0.0475
ALA 21
ALA 22
0.0279
ALA 22
GLY 23
-0.0298
GLY 23
VAL 24
-0.0428
VAL 24
MET 25
0.0064
MET 25
VAL 26
-0.0406
VAL 26
SER 27
0.0209
SER 27
SER 28
-0.0419
SER 28
VAL 29
0.0097
VAL 29
VAL 30
-0.0089
VAL 30
VAL 31
-0.0166
VAL 31
LYS 32
-0.0093
LYS 32
ASN 33
0.0077
ASN 33
THR 34
0.0102
THR 34
GLN 35
0.0084
GLN 35
ASP 36
0.0350
ASP 36
TYR 37
0.0044
TYR 37
PRO 38
0.0001
PRO 38
VAL 39
0.0391
VAL 39
LEU 40
-0.0178
LEU 40
ILE 41
0.0396
ILE 41
GLN 42
0.0498
GLN 42
SER 43
0.0316
SER 43
ARG 44
0.0302
ARG 44
ILE 45
0.0441
ILE 45
TYR 46
-0.0077
TYR 46
ASP 47
0.0074
ASP 47
PRO 48
-0.0397
PRO 48
PHE 49
0.0139
PHE 49
VAL 50
0.0086
VAL 50
VAL 51
-0.0077
VAL 51
VAL 52
-0.0037
VAL 52
THR 53
-0.0011
THR 53
PRO 54
-0.0636
PRO 54
PRO 55
-0.0010
PRO 55
LEU 56
0.0208
LEU 56
PHE 57
0.0053
PHE 57
ARG 58
-0.0346
ARG 58
LEU 59
0.0115
LEU 59
ASP 60
-0.0195
ASP 60
ALA 61
0.0116
ALA 61
LYS 62
0.0017
LYS 62
GLN 63
-0.0163
GLN 63
GLN 64
-0.0626
GLN 64
ASN 65
-0.0250
ASN 65
SER 66
-0.0567
SER 66
SER 67
0.0179
SER 67
LEU 68
-0.0108
LEU 68
ARG 69
-0.0248
ARG 69
ILE 70
-0.0096
ILE 70
ALA 71
0.0059
ALA 71
GLN 72
-0.0378
GLN 72
ALA 73
0.0292
ALA 73
GLY 74
-0.0257
GLY 74
GLY 75
-0.0077
GLY 75
VAL 76
-0.0188
VAL 76
PHE 77
-0.0127
PHE 77
PRO 78
-0.0322
PRO 78
ARG 79
0.0097
ARG 79
ASP 80
-0.0313
ASP 80
LYS 81
0.0042
LYS 81
GLU 82
0.0391
GLU 82
SER 83
0.0380
SER 83
LEU 84
0.0574
LEU 84
LYS 85
-0.0707
LYS 85
TRP 86
0.0906
TRP 86
LEU 87
-0.0526
LEU 87
CYS 88
0.0449
CYS 88
VAL 89
0.0577
VAL 89
LYS 90
0.1152
LYS 90
GLY 91
0.0646
GLY 91
ILE 92
-0.0144
ILE 92
PRO 93
0.0353
PRO 93
LYS 94
0.2303
LYS 94
ASP 95
0.0869
ASP 95
VAL 96
-0.0176
VAL 96
GLY 97
0.0301
GLY 97
VAL 98
0.0503
VAL 98
PHE 99
0.0313
PHE 99
VAL 100
-0.0004
VAL 100
GLN 101
-0.0330
GLN 101
PHE 102
0.0179
PHE 102
ALA 103
-0.1837
ALA 103
ILE 104
-0.0053
ILE 104
ASN 105
-0.0898
ASN 105
ASN 106
0.0305
ASN 106
CYS 107
0.1497
CYS 107
ILE 108
0.1134
ILE 108
LYS 109
0.1066
LYS 109
LEU 110
-0.0544
LEU 110
LEU 111
0.0821
LEU 111
VAL 112
-0.0213
VAL 112
ARG 113
0.0434
ARG 113
PRO 114
0.0202
PRO 114
ASN 115
-0.0309
ASN 115
GLU 116
-0.0092
GLU 116
LEU 117
0.0360
LEU 117
LYS 118
0.0071
LYS 118
GLY 119
0.0036
GLY 119
THR 120
-0.0240
THR 120
PRO 121
-0.0410
PRO 121
ILE 122
0.0247
ILE 122
GLN 123
-0.0195
GLN 123
PHE 124
-0.0193
PHE 124
ALA 125
0.0485
ALA 125
GLU 126
-0.0025
GLU 126
ASN 127
-0.0546
ASN 127
LEU 128
0.0301
LEU 128
SER 129
0.0293
SER 129
TRP 130
0.0735
TRP 130
LYS 131
0.0303
LYS 131
VAL 132
0.0472
VAL 132
ASP 133
0.0163
ASP 133
GLY 134
0.0154
GLY 134
GLY 135
0.0162
GLY 135
LYS 136
-0.0358
LYS 136
LEU 137
0.0266
LEU 137
ILE 138
0.0235
ILE 138
ALA 139
-0.0115
ALA 139
GLU 140
0.0181
GLU 140
ASN 141
0.0378
ASN 141
PRO 142
-0.0169
PRO 142
SER 143
0.0447
SER 143
PRO 144
0.0608
PRO 144
PHE 145
-0.0166
PHE 145
TYR 146
-0.0252
TYR 146
MET 147
-0.0436
MET 147
ASN 148
0.0120
ASN 148
ILE 149
-0.0881
ILE 149
GLY 150
0.0228
GLY 150
GLU 151
-0.0521
GLU 151
LEU 152
-0.0034
LEU 152
THR 153
-0.0434
THR 153
PHE 154
-0.0155
PHE 154
GLY 155
-0.0135
GLY 155
GLY 156
-0.0097
GLY 156
LYS 157
0.0013
LYS 157
SER 158
-0.0302
SER 158
ILE 159
0.0060
ILE 159
PRO 160
0.0248
PRO 160
SER 161
-0.1998
SER 161
HIS 162
-0.0038
HIS 162
TYR 163
-0.1147
TYR 163
ILE 164
-0.0505
ILE 164
PRO 165
-0.0271
PRO 165
PRO 166
-0.0683
PRO 166
LYS 167
0.0336
LYS 167
SER 168
-0.0134
SER 168
THR 169
-0.0309
THR 169
TRP 170
-0.0073
TRP 170
ALA 171
-0.0676
ALA 171
PHE 172
0.0535
PHE 172
ASP 173
-0.0892
ASP 173
LEU 174
0.0040
LEU 174
PRO 175
-0.0253
PRO 175
ASN 176
0.0176
ASN 176
VAL 177
0.0145
VAL 177
SER 178
-0.0132
SER 178
TRP 179
-0.0001
TRP 179
ARG 180
0.0079
ARG 180
ILE 181
0.0014
ILE 181
ILE 182
0.0301
ILE 182
ASN 183
-0.0447
ASN 183
ASP 184
0.0314
ASP 184
GLN 185
-0.0138
GLN 185
GLY 186
0.0284
GLY 186
GLY 187
0.0685
GLY 187
LEU 188
0.0023
LEU 188
ASP 189
-0.0149
ASP 189
ARG 190
0.0259
ARG 190
LEU 191
0.0228
LEU 191
TYR 192
-0.0112
TYR 192
SER 193
0.0592
SER 193
LYS 194
-0.0143
LYS 194
ASN 195
0.0153
ASN 195
VAL 196
-0.0103
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.