This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PHE 1
ALA 2
0.0587
ALA 2
SER 3
0.0015
SER 3
LYS 4
-0.0114
LYS 4
GLU 5
-0.0128
GLU 5
TYR 6
0.0218
TYR 6
GLY 7
-0.0051
GLY 7
VAL 8
-0.0215
VAL 8
THR 9
-0.0014
THR 9
ILE 10
-0.0012
ILE 10
GLY 11
0.0072
GLY 11
GLU 12
0.0294
GLU 12
SER 13
-0.0341
SER 13
ARG 14
-0.0199
ARG 14
ILE 15
-0.0571
ILE 15
ILE 16
0.0501
ILE 16
TYR 17
0.0030
TYR 17
PRO 18
-0.0305
PRO 18
LEU 19
-0.0076
LEU 19
ASP 20
-0.0344
ASP 20
ALA 21
0.0512
ALA 21
ALA 22
-0.0375
ALA 22
GLY 23
-0.0033
GLY 23
VAL 24
0.0729
VAL 24
MET 25
0.0135
MET 25
VAL 26
0.0960
VAL 26
SER 27
-0.0366
SER 27
SER 28
0.1046
SER 28
VAL 29
-0.0258
VAL 29
VAL 30
0.0375
VAL 30
VAL 31
0.0086
VAL 31
LYS 32
0.0107
LYS 32
ASN 33
0.0162
ASN 33
THR 34
-0.0058
THR 34
GLN 35
0.0047
GLN 35
ASP 36
-0.0143
ASP 36
TYR 37
-0.0130
TYR 37
PRO 38
-0.0074
PRO 38
VAL 39
-0.0402
VAL 39
LEU 40
-0.0148
LEU 40
ILE 41
-0.0151
ILE 41
GLN 42
-0.0541
GLN 42
SER 43
-0.0013
SER 43
ARG 44
-0.0495
ARG 44
ILE 45
-0.0438
ILE 45
TYR 46
0.0130
TYR 46
ASP 47
-0.0044
ASP 47
PRO 48
0.0093
PRO 48
PHE 49
-0.0002
PHE 49
VAL 50
-0.0006
VAL 50
VAL 51
-0.0068
VAL 51
VAL 52
0.0073
VAL 52
THR 53
-0.0440
THR 53
PRO 54
0.1042
PRO 54
PRO 55
-0.0118
PRO 55
LEU 56
0.0058
LEU 56
PHE 57
-0.0292
PHE 57
ARG 58
0.0101
ARG 58
LEU 59
-0.0059
LEU 59
ASP 60
0.0079
ASP 60
ALA 61
-0.0247
ALA 61
LYS 62
0.0096
LYS 62
GLN 63
0.0057
GLN 63
GLN 64
0.0489
GLN 64
ASN 65
0.0031
ASN 65
SER 66
0.0721
SER 66
SER 67
-0.0263
SER 67
LEU 68
-0.0144
LEU 68
ARG 69
0.0433
ARG 69
ILE 70
0.0118
ILE 70
ALA 71
-0.0309
ALA 71
GLN 72
0.0471
GLN 72
ALA 73
0.0111
ALA 73
GLY 74
0.0015
GLY 74
GLY 75
-0.0026
GLY 75
VAL 76
-0.0067
VAL 76
PHE 77
0.0082
PHE 77
PRO 78
-0.0173
PRO 78
ARG 79
-0.0213
ARG 79
ASP 80
0.0784
ASP 80
LYS 81
-0.0178
LYS 81
GLU 82
-0.0214
GLU 82
SER 83
-0.0413
SER 83
LEU 84
-0.0580
LEU 84
LYS 85
-0.1129
LYS 85
TRP 86
-0.0670
TRP 86
LEU 87
-0.0594
LEU 87
CYS 88
-0.0501
CYS 88
VAL 89
-0.0745
VAL 89
LYS 90
-0.0751
LYS 90
GLY 91
-0.0546
GLY 91
ILE 92
-0.0388
ILE 92
PRO 93
0.0214
PRO 93
LYS 94
-0.0463
LYS 94
ASP 95
0.0595
ASP 95
VAL 96
0.0366
VAL 96
GLY 97
-0.0465
GLY 97
VAL 98
0.0702
VAL 98
PHE 99
0.0161
PHE 99
VAL 100
0.0087
VAL 100
GLN 101
-0.0166
GLN 101
PHE 102
-0.0498
PHE 102
ALA 103
0.0283
ALA 103
ILE 104
-0.0773
ILE 104
ASN 105
-0.0465
ASN 105
ASN 106
-0.0224
ASN 106
CYS 107
-0.1318
CYS 107
ILE 108
-0.0743
ILE 108
LYS 109
-0.1490
LYS 109
LEU 110
-0.0957
LEU 110
LEU 111
-0.0353
LEU 111
VAL 112
-0.0205
VAL 112
ARG 113
-0.0338
ARG 113
PRO 114
-0.0242
PRO 114
ASN 115
-0.0150
ASN 115
GLU 116
0.0652
GLU 116
LEU 117
0.0126
LEU 117
LYS 118
-0.0264
LYS 118
GLY 119
-0.0157
GLY 119
THR 120
-0.0333
THR 120
PRO 121
-0.0260
PRO 121
ILE 122
0.0010
ILE 122
GLN 123
-0.0042
GLN 123
PHE 124
-0.0148
PHE 124
ALA 125
0.0303
ALA 125
GLU 126
-0.0075
GLU 126
ASN 127
-0.0253
ASN 127
LEU 128
0.0114
LEU 128
SER 129
0.0096
SER 129
TRP 130
0.0446
TRP 130
LYS 131
0.0151
LYS 131
VAL 132
0.0295
VAL 132
ASP 133
0.0082
ASP 133
GLY 134
0.0146
GLY 134
GLY 135
-0.0079
GLY 135
LYS 136
-0.0006
LYS 136
LEU 137
0.0154
LEU 137
ILE 138
0.0275
ILE 138
ALA 139
0.0052
ALA 139
GLU 140
0.0241
GLU 140
ASN 141
0.0454
ASN 141
PRO 142
-0.0263
PRO 142
SER 143
0.0392
SER 143
PRO 144
0.0723
PRO 144
PHE 145
-0.0071
PHE 145
TYR 146
-0.0477
TYR 146
MET 147
-0.0169
MET 147
ASN 148
-0.0255
ASN 148
ILE 149
-0.0531
ILE 149
GLY 150
0.0108
GLY 150
GLU 151
-0.0272
GLU 151
LEU 152
-0.0097
LEU 152
THR 153
-0.0169
THR 153
PHE 154
-0.0073
PHE 154
GLY 155
-0.0073
GLY 155
GLY 156
0.0024
GLY 156
LYS 157
-0.0067
LYS 157
SER 158
-0.0078
SER 158
ILE 159
0.0072
ILE 159
PRO 160
-0.0303
PRO 160
SER 161
0.0131
SER 161
HIS 162
-0.0211
HIS 162
TYR 163
-0.0054
TYR 163
ILE 164
-0.0514
ILE 164
PRO 165
0.0087
PRO 165
PRO 166
0.0142
PRO 166
LYS 167
-0.0367
LYS 167
SER 168
0.0931
SER 168
THR 169
0.0354
THR 169
TRP 170
0.0079
TRP 170
ALA 171
-0.0049
ALA 171
PHE 172
0.0266
PHE 172
ASP 173
-0.0151
ASP 173
LEU 174
0.0005
LEU 174
PRO 175
-0.0051
PRO 175
ASN 176
0.0070
ASN 176
VAL 177
0.0120
VAL 177
SER 178
-0.0047
SER 178
TRP 179
-0.0056
TRP 179
ARG 180
-0.0024
ARG 180
ILE 181
-0.0037
ILE 181
ILE 182
-0.0046
ILE 182
ASN 183
-0.0225
ASN 183
ASP 184
0.0088
ASP 184
GLN 185
-0.0235
GLN 185
GLY 186
0.0164
GLY 186
GLY 187
0.0403
GLY 187
LEU 188
-0.0118
LEU 188
ASP 189
-0.0017
ASP 189
ARG 190
0.0079
ARG 190
LEU 191
0.0043
LEU 191
TYR 192
-0.0002
TYR 192
SER 193
0.0210
SER 193
LYS 194
-0.0014
LYS 194
ASN 195
0.0052
ASN 195
VAL 196
-0.0045
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.